RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 GNSP15586 552 aa14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 PDCP20941 246 aa14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 WNT7BP56706 349 aa14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 SLC7A9P82251 487 aa14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 CCDC157Q569K6 752 aa14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 C10orf76Q5T2E6 689 aa14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 SYCP2LQ5T4T6 812 aa14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 BRAPQ7Z569 592 aa14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 RHBDD1Q8TEB9 315 aa14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 GAREM1Q9H706 876 aa14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 CD248Q9HCU0 757 aa14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 LARSQ9P2J5 1176 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 AGAP1Q9UPQ3 857 aa14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 BTBD3Q9Y2F9 522 aa14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 FNDC3AQ9Y2H6 1198 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 ZNF840PA6NDX5 716 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 SLC9A3R1O14745 358 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 ZNF217O75362 1048 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 TULP3O75386 442 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 DKK1O94907 266 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 PLA2G4BP0C869 781 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 POLR2BP30876 1174 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 NTSR1P30989 418 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 BNC1Q01954 994 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 CFAP221Q4G0U5 840 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 EGFLAMQ63HQ2 1017 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 ADALQ6DHV7 355 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 BAHD1Q8TBE0 780 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 IPO4Q8TEX9 1081 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 MIR1-1HGQ9H1L0 117 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 PRORYQ9H606 182 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 TM7SF3Q9NS93 570 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 SUSD2Q9UGT4 822 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 RAD54BQ9Y620 910 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 TCHHQ07283 1943 aa14.68□□□□□ -0.06
SHKBP1-208ENST00000595726 KNL1Q8NG31 2342 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 VWA3AA6NCI4 1184 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 H0YCG3 227 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 K7ENM7 598 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 HUS1O60921 280 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 CILPO75339 1184 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 ITGB3P05106 788 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 SYT1P21579 422 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 BDNFP23560 247 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 PDE6CP51160 858 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 MYL7Q01449 175 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 ARL6IP4Q66PJ3 421 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 CRELD2Q6UXH1 353 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 TMEM25Q86YD3 366 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 ETFBKMTQ8IXQ9 262 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 ZCCHC9Q8N567 271 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 MYCT1Q8N699 235 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 PDCD7Q8N8D1 485 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 SNX21Q969T3 373 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 REEP2Q9BRK0 252 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 ZDHHC5Q9C0B5 715 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 DEC1Q9P2X7 70 aa14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.67□□□□□ -0.06
SHKBP1-208ENST00000595726 PIEZO2Q9H5I5 2752 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 MYH11P35749 1972 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 A0A1B0GTW7 788 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 WASH3PC4AMC7 463 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 PLCG1P19174 1290 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 LMO2P25791 158 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 GRIK1P39086 918 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 EIF2S3P41091 472 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 MAGEA11P43364 429 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 PSMC1P62191 440 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 TFAMQ00059 246 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 GAD2Q05329 585 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 DHX8Q14562 1220 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 HLA-BQ31612 363 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 WDR45BQ5MNZ6 344 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 FAM171BQ6P995 826 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 KIAA1324Q6UXG2 1013 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 DENND5BQ6ZUT9 1274 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 TRMT11Q7Z4G4 463 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 CHPFQ8IZ52 775 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 GALNT15Q8N3T1 639 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 FOXJ1Q92949 421 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 WBP2Q969T9 261 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 SPATA17Q96L03 361 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 MRGPRX1Q96LB2 322 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 ZNF560Q96MR9 790 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 MAGEC2Q9UBF1 373 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 AGO2Q9UKV8 859 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 SNX9Q9Y5X1 595 aa14.66□□□□□ -0.06
SHKBP1-208ENST00000595726 PYCARD-AS1I3L0S3 204 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 J3QKU1 62 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 PLK4O00444 970 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 ZBTB24O43167 697 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 OLFM2O95897 454 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 OAS1P00973 400 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 MBL2P11226 248 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 PNPLA4P41247 253 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 MATKP42679 507 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 CLDN6P56747 220 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 MYO1EQ12965 1108 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms