RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 CPQQ9Y646 472 aa16.97■□□□□ 0.31
IRF3-210ENST00000595240 ANAPC1Q9H1A4 1944 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 PTPRZ1P23471 2315 aaPredicted RBP16.96■□□□□ 0.31
IRF3-210ENST00000595240 PPP1R3GB7ZBB8 358 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 ZDHHC11BP0C7U3 371 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 ADORA2BP29275 332 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 GJA4P35212 333 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 TUBP50607 506 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 FSTL4Q6MZW2 842 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 CLEC20AQ6ZU45 233 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 TTC39CQ8N584 583 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 CYFIP2Q96F07 1278 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 ARID3AQ99856 593 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 LINC00597Q9H2U6 94 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 FBXO44Q9H4M3 255 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 METTL14Q9HCE5 456 aaKnown RBP16.96■□□□□ 0.31
IRF3-210ENST00000595240 CISHQ9NSE2 258 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 SMPD4Q9NXE4 827 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 GMIPQ9P107 970 aa16.96■□□□□ 0.31
IRF3-210ENST00000595240 CHORDC1Q9UHD1 332 aaPredicted RBP16.96■□□□□ 0.31
IRF3-210ENST00000595240 HHLA1C9JL84 531 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 COCHO43405 550 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 LILRB5O75023 590 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 PAPSS2O95340 614 aaPredicted RBP16.95■□□□□ 0.3
IRF3-210ENST00000595240 CXCL12P48061 93 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 UBE2HP62256 183 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 SATB1Q01826 763 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 GRSF1Q12849 480 aaKnown RBP eCLIP16.95■□□□□ 0.3
IRF3-210ENST00000595240 PPP2R5DQ14738 602 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 HECTD3Q5T447 861 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 KLHL10Q6JEL2 608 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 GPRIN1Q7Z2K8 1008 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 FILIP1Q7Z7B0 1213 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 NELFBQ8WX92 580 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 ATRIPQ8WXE1 791 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 TATDN2Q93075 761 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 DNAI2Q9GZS0 605 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 FBRSL1Q9HCM7 1045 aaKnown RBP16.95■□□□□ 0.3
IRF3-210ENST00000595240 PNPLA8Q9NP80 782 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 FAM186AA6NE01 2351 aa16.95■□□□□ 0.3
IRF3-210ENST00000595240 BIN1O00499 593 aa16.94■□□□□ 0.3
IRF3-210ENST00000595240 NFATC1O95644 943 aa16.94■□□□□ 0.3
IRF3-210ENST00000595240 MBL2P11226 248 aaPredicted RBP16.94■□□□□ 0.3
IRF3-210ENST00000595240 PGFP49763 221 aa16.94■□□□□ 0.3
IRF3-210ENST00000595240 RAD23BP54727 409 aa16.94■□□□□ 0.3
IRF3-210ENST00000595240 NRLP54845 237 aa16.94■□□□□ 0.3
IRF3-210ENST00000595240 ZNF394Q53GI3 561 aa16.94■□□□□ 0.3
IRF3-210ENST00000595240 NAIF1Q69YI7 327 aaPredicted RBP16.94■□□□□ 0.3
IRF3-210ENST00000595240 DDX42Q86XP3 938 aaKnown RBP eCLIP16.94■□□□□ 0.3
IRF3-210ENST00000595240 TMEM176AQ96HP8 235 aa16.94■□□□□ 0.3
IRF3-210ENST00000595240 ZFRQ96KR1 1074 aaKnown RBP16.94■□□□□ 0.3
IRF3-210ENST00000595240 P2RY13Q9BPV8 354 aa16.94■□□□□ 0.3
IRF3-210ENST00000595240 CCSER2Q9H7U1 834 aa16.94■□□□□ 0.3
IRF3-210ENST00000595240 CFAP97Q9P2B7 532 aa16.94■□□□□ 0.3
IRF3-210ENST00000595240 SCML2Q9UQR0 700 aa16.94■□□□□ 0.3
IRF3-210ENST00000595240 ZNF638Q14966 1978 aaKnown RBP16.93■□□□□ 0.3
IRF3-210ENST00000595240 GPR179Q6PRD1 2367 aa16.93■□□□□ 0.3
IRF3-210ENST00000595240 BICDL2A1A5D9 508 aa16.93■□□□□ 0.3
IRF3-210ENST00000595240 PMM2O15305 246 aa16.93■□□□□ 0.3
IRF3-210ENST00000595240 DRD1P21728 446 aa16.93■□□□□ 0.3
IRF3-210ENST00000595240 FMO5P49326 533 aa16.93■□□□□ 0.3
IRF3-210ENST00000595240 GALK1P51570 392 aa16.93■□□□□ 0.3
IRF3-210ENST00000595240 NR1H3Q13133 447 aa16.93■□□□□ 0.3
IRF3-210ENST00000595240 PPP1R26Q5T8A7 1209 aaPredicted RBP16.93■□□□□ 0.3
IRF3-210ENST00000595240 SUMF1Q8NBK3 374 aa16.93■□□□□ 0.3
IRF3-210ENST00000595240 SLC4A11Q8NBS3 891 aa16.93■□□□□ 0.3
IRF3-210ENST00000595240 EXOC4Q96A65 974 aa16.93■□□□□ 0.3
IRF3-210ENST00000595240 HEXIM2Q96MH2 286 aaKnown RBP16.93■□□□□ 0.3
IRF3-210ENST00000595240 DUSP16Q9BY84 665 aa16.93■□□□□ 0.3
IRF3-210ENST00000595240 C2orf42Q9NWW7 574 aa16.93■□□□□ 0.3
IRF3-210ENST00000595240 CTNND2Q9UQB3 1225 aa16.93■□□□□ 0.3
IRF3-210ENST00000595240 GVINP1Q7Z2Y8 2422 aa16.93■□□□□ 0.3
IRF3-210ENST00000595240 CFAP54Q96N23 3096 aa16.93■□□□□ 0.3
IRF3-210ENST00000595240 FANCMQ8IYD8 2048 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 E2F8A0AVK6 867 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 K7ESF4 209 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 SLC9A3R1O14745 358 aaPredicted RBP16.92■□□□□ 0.3
IRF3-210ENST00000595240 TLR5O60602 858 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 EGFP01133 1207 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 HOXA6P31267 233 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 PAK1Q13153 545 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 CUL2Q13617 745 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 GAB4Q2WGN9 574 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 CCDC40Q4G0X9 1142 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 ARHGAP17Q68EM7 881 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 PKN3Q6P5Z2 889 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 ADGRG2Q8IZP9 1017 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 TRIML1Q8N9V2 468 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 JAKMIP2Q96AA8 810 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 EPC1Q9H2F5 836 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 CYLDQ9NQC7 956 aa16.92■□□□□ 0.3
IRF3-210ENST00000595240 TLR8Q9NR97 1041 aaKnown RBP16.92■□□□□ 0.3
IRF3-210ENST00000595240 EP300Q09472 2414 aaPredicted RBP16.91■□□□□ 0.3
IRF3-210ENST00000595240 SCAMP3O14828 347 aaKnown RBP16.91■□□□□ 0.3
IRF3-210ENST00000595240 CYP26A1O43174 497 aa16.91■□□□□ 0.3
IRF3-210ENST00000595240 CYP17A1P05093 508 aa16.91■□□□□ 0.3
IRF3-210ENST00000595240 ACO1P21399 889 aaKnown RBP16.91■□□□□ 0.3
IRF3-210ENST00000595240 KIF11P52732 1056 aa16.91■□□□□ 0.3
IRF3-210ENST00000595240 FBXO43Q4G163 708 aa16.91■□□□□ 0.3
IRF3-210ENST00000595240 EZH1Q92800 747 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms