RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 HECTD3Q5T447 861 aa18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 CLEC20AQ6ZU45 233 aa18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 C12orf29Q8N999 325 aa18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 TMEM176AQ96HP8 235 aa18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 EBF3Q9H4W6 596 aa18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 HPS4Q9NQG7 708 aa18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 PRMT8Q9NR22 394 aaPredicted RBP18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 TLR8Q9NR97 1041 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 F5P12259 2224 aa18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 MYH10P35580 1976 aa18.75■□□□□ 0.59
SHKBP1-204ENST00000594862 GFRA3O60609 400 aa18.75■□□□□ 0.59
SHKBP1-204ENST00000594862 CHRNB1P11230 501 aa18.75■□□□□ 0.59
SHKBP1-204ENST00000594862 SOX9P48436 509 aa18.75■□□□□ 0.59
SHKBP1-204ENST00000594862 GRSF1Q12849 480 aaKnown RBP eCLIP18.75■□□□□ 0.59
SHKBP1-204ENST00000594862 CLEC17AQ6ZS10 378 aa18.75■□□□□ 0.59
SHKBP1-204ENST00000594862 MLKLQ8NB16 471 aa18.75■□□□□ 0.59
SHKBP1-204ENST00000594862 ZMIZ2Q8NF64 920 aa18.75■□□□□ 0.59
SHKBP1-204ENST00000594862 CCDC26Q8TAB7 109 aa18.75■□□□□ 0.59
SHKBP1-204ENST00000594862 WHAMMQ8TF30 809 aa18.75■□□□□ 0.59
SHKBP1-204ENST00000594862 HEXIM2Q96MH2 286 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-204ENST00000594862 NT5C1BQ96P26 610 aa18.75■□□□□ 0.59
SHKBP1-204ENST00000594862 NACA2Q9H009 215 aa18.75■□□□□ 0.59
SHKBP1-204ENST00000594862 RWDD2AQ9UIY3 292 aa18.75■□□□□ 0.59
SHKBP1-204ENST00000594862 MYO16Q9Y6X6 1858 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 LEFTY2O00292 366 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 ZDHHC11BP0C7U3 371 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 MBL2P11226 248 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 PSEN1P49768 467 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 NRLP54845 237 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 MTAPQ13126 283 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 ARHGAP17Q68EM7 881 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 TADA2BQ86TJ2 420 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 SPEM1Q8N4L4 309 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 TTC16Q8NEE8 873 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 SCAMP5Q8TAC9 235 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 DUSP16Q9BY84 665 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 ECT2Q9H8V3 914 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 TBC1D14Q9P2M4 693 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 KIAA1257Q9ULG3 409 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 SCML2Q9UQR0 700 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 PCDHGA2Q9Y5H1 932 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 CPQQ9Y646 472 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 DCHS1Q96JQ0 3298 aa18.74■□□□□ 0.59
SHKBP1-204ENST00000594862 TRDMT1O14717 391 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 DRD1P21728 446 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 RAD23BP54727 409 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 GOLGA8FQ08AF8 430 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 GOLGA8DPQ0D2H9 430 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 CCINQ13939 588 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 PON2Q15165 354 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 CAMK4Q16566 473 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 EML3Q32P44 896 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 ZNF394Q53GI3 561 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 TRIM68Q6AZZ1 485 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 TXNDC11Q6PKC3 985 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 TRIM59Q8IWR1 403 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 SLC4A11Q8NBS3 891 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 TTC8Q8TAM2 541 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 RIN3Q8TB24 985 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 TATDN2Q93075 761 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 OTUB2Q96DC9 234 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 CDK5RAP1Q96SZ6 601 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 ARID3AQ99856 593 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 UBXN6Q9BZV1 441 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 CLSTN2Q9H4D0 955 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 GMIPQ9P107 970 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 DACH1Q9UI36 760 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 WNT6Q9Y6F9 365 aa18.73■□□□□ 0.59
SHKBP1-204ENST00000594862 E2F8A0AVK6 867 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 PRR23AA6NEV1 266 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 COCHO43405 550 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 ATG13O75143 517 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 BEST1O76090 585 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 PAPSS2O95340 614 aaPredicted RBP18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 AFPP02771 609 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 ARSAP15289 507 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 STX17P56962 302 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 CSTF1Q05048 431 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 FBXO43Q4G163 708 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 SGO2Q562F6 1265 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 TMEM196Q5HYL7 178 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 PPP1R26Q5T8A7 1209 aaPredicted RBP18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 MAML2Q8IZL2 1156 aaPredicted RBP18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 GBP4Q96PP9 640 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 P2RY13Q9BPV8 354 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 SRRTQ9BXP5 876 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 RNF38Q9H0F5 515 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 CYLDQ9NQC7 956 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 ZSCAN32Q9NX65 697 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 HESX1Q9UBX0 185 aa18.72■□□□□ 0.59
SHKBP1-204ENST00000594862 FANCMQ8IYD8 2048 aa18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 HHLA1C9JL84 531 aa18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 TLR5O60602 858 aa18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 PRKCSHP14314 528 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 ACO1P21399 889 aaKnown RBP18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 GJA4P35212 333 aa18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 CXCL12P48061 93 aa18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 BCAT1P54687 386 aa18.71■□□□□ 0.59
SHKBP1-204ENST00000594862 GCNT1Q02742 428 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms