RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 RIOX1Q9H6W3 641 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 GBA2Q9HCG7 927 aaPredicted RBP5.86□□□□□ -1.47
SMAD4-216ENST00000593223 ARHGEF3Q9NR81 526 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 CDY1Q9Y6F8 540 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 KIAA0556O60303 1618 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 FANCAO15360 1455 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 CCDC194A0A1B0GVG4 234 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 A1L4Q6 167 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 CCP110O43303 1012 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 PIAS2O75928 621 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 ONECUT2O95948 504 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 NUDT3O95989 172 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 FESP07332 822 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 CSF1RP07333 972 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 ANXA2P07355 339 aaKnown RBP5.85□□□□□ -1.47
SMAD4-216ENST00000593223 IL1R1P14778 569 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 TPH1P17752 444 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 PRIM2P49643 509 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 ZNF543Q08ER8 600 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 LONRF1Q17RB8 773 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 PTCHD3Q3KNS1 767 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 PRR16Q569H4 304 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 CERCAMQ5T4B2 595 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 TSTD2Q5T7W7 516 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 STRIP1Q5VSL9 837 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 IL31Q6EBC2 164 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 ZNF551Q7Z340 670 aaPredicted RBP5.85□□□□□ -1.47
SMAD4-216ENST00000593223 KCTD20Q7Z5Y7 419 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 LRRC71Q8N4P6 559 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 DNAJB14Q8TBM8 379 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 PARD3BQ8TEW8 1205 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 RFKQ969G6 155 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 R3HDM4Q96D70 268 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 HAPLN3Q96S86 360 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 NAA15Q9BXJ9 866 aaKnown RBP5.85□□□□□ -1.47
SMAD4-216ENST00000593223 SLC17A6Q9P2U8 582 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 INSL6Q9Y581 213 aa5.85□□□□□ -1.47
SMAD4-216ENST00000593223 SETD1BQ9UPS6 1966 aaKnown RBP5.84□□□□□ -1.47
SMAD4-216ENST00000593223 MGST3O14880 152 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 THAP12O43422 761 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 IL6RP08887 468 aaPredicted RBP5.84□□□□□ -1.47
SMAD4-216ENST00000593223 IL1R2P27930 398 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 LIPAP38571 399 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 STT3AP46977 705 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 CPT1AP50416 773 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 NEK3P51956 506 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 STK3Q13188 491 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 CCNIQ14094 377 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 MAP9Q49MG5 647 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 KLHDC7AQ5VTJ3 777 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 IZUMO1Q8IYV9 350 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 ABRAQ8N0Z2 381 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 TMTC2Q8N394 836 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 SIMC1Q8NDZ2 872 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 ZG16BQ96DA0 208 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 DPCDQ9BVM2 203 aaPredicted RBP5.84□□□□□ -1.47
SMAD4-216ENST00000593223 IL17RBQ9NRM6 502 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 SNX14Q9Y5W7 946 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 CAMSAP1Q5T5Y3 1602 aa5.84□□□□□ -1.47
SMAD4-216ENST00000593223 ARHGEF40Q8TER5 1519 aa5.84□□□□□ -1.48
SMAD4-216ENST00000593223 PTPRKQ15262 1439 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 AQP7P3A6NL99 342 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 ZAR1LA6NP61 321 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 QSOX1O00391 747 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 RRP9O43818 475 aaKnown RBP5.83□□□□□ -1.48
SMAD4-216ENST00000593223 PEX14O75381 377 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 ERBB2P04626 1255 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 BTF3P20290 206 aaKnown RBP5.83□□□□□ -1.48
SMAD4-216ENST00000593223 MCCP23508 829 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 MTHFSP49914 203 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 CCT8P50990 548 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 CASP5P51878 434 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 ATXN1P54253 815 aaKnown RBP5.83□□□□□ -1.48
SMAD4-216ENST00000593223 CACNA2D1P54289 1103 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 COL10A1Q03692 680 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 LY6KQ17RY6 165 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 RRAGBQ5VZM2 374 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 ARHGEF25Q86VW2 580 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 ATP11CQ8NB49 1132 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 TNIP3Q96KP6 325 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 C17orf80Q9BSJ5 609 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 DHX36Q9H2U1 1008 aaKnown RBP5.83□□□□□ -1.48
SMAD4-216ENST00000593223 SYNPO2LQ9H987 977 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 CPNE5Q9HCH3 593 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 DNMT3BQ9UBC3 853 aaKnown RBP5.83□□□□□ -1.48
SMAD4-216ENST00000593223 SH2B3Q9UQQ2 575 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 ERICH3Q5RHP9 1530 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 ARHGEF12Q9NZN5 1544 aa5.83□□□□□ -1.48
SMAD4-216ENST00000593223 GCOM1H8Y6P7 765 aaPredicted RBP5.82□□□□□ -1.48
SMAD4-216ENST00000593223 PSMD9O00233 223 aa5.82□□□□□ -1.48
SMAD4-216ENST00000593223 CREB3O43889 395 aa5.82□□□□□ -1.48
SMAD4-216ENST00000593223 VNN1O95497 513 aa5.82□□□□□ -1.48
SMAD4-216ENST00000593223 CYP2C18P33260 490 aa5.82□□□□□ -1.48
SMAD4-216ENST00000593223 BCAT1P54687 386 aa5.82□□□□□ -1.48
SMAD4-216ENST00000593223 AK2P54819 239 aa5.82□□□□□ -1.48
SMAD4-216ENST00000593223 TPTEP56180 551 aa5.82□□□□□ -1.48
SMAD4-216ENST00000593223 NPY5RQ15761 445 aa5.82□□□□□ -1.48
SMAD4-216ENST00000593223 SLC9A4Q6AI14 798 aa5.82□□□□□ -1.48
SMAD4-216ENST00000593223 CAND1Q86VP6 1230 aaKnown RBP5.82□□□□□ -1.48
SMAD4-216ENST00000593223 RASAL3Q86YV0 1011 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms