RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 RGS7P49802 495 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 SMAD4Q13485 552 aaKnown RBP14.16□□□□□ -0.14
VMP1-217ENST00000593168 CAMK1Q14012 370 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 CCDC142Q17RM4 750 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 ZNF280DQ6N043 979 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 DCUN1D2Q6PH85 259 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 KCNT2Q6UVM3 1135 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 CLEC20AQ6ZU45 233 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 FAM35AQ86V20 835 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 PIGZQ86VD9 579 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 LRRTM3Q86VH5 581 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 TMEM173Q86WV6 379 aaPredicted RBP14.16□□□□□ -0.14
VMP1-217ENST00000593168 RNF168Q8IYW5 571 aaPredicted RBP14.16□□□□□ -0.14
VMP1-217ENST00000593168 FNIP1Q8TF40 1166 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 CLP1Q92989 425 aaKnown RBP14.16□□□□□ -0.14
VMP1-217ENST00000593168 SMARCD1Q96GM5 515 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 HES6Q96HZ4 224 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 ZNF558Q96NG5 402 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 GOLPH3Q9H4A6 298 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 TJP2Q9UDY2 1190 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 RWDD3Q9Y3V2 267 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 PLXNA4Q9HCM2 1894 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 MIF4GDA9UHW6 222 aaKnown RBP14.15□□□□□ -0.14
VMP1-217ENST00000593168 CES2O00748 559 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 TBC1D4O60343 1298 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 AP1G2O75843 785 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 GABBR2O75899 941 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 COMTP21964 271 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 RPL7AP62424 266 aaKnown RBP14.15□□□□□ -0.14
VMP1-217ENST00000593168 SLC6A3Q01959 620 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 ADAM15Q13444 863 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 NFE2Q16621 373 aaPredicted RBP14.15□□□□□ -0.14
VMP1-217ENST00000593168 WHAMMP3Q1A5X7 153 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 CTXN3Q4LDR2 81 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 SPOUT1Q5T280 376 aaKnown RBP14.15□□□□□ -0.14
VMP1-217ENST00000593168 OR6B2Q6IFH4 312 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 C4orf50Q6ZRC1 276 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 ANKS3Q6ZW76 656 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 SLC39A11Q8N1S5 342 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 BCL7CQ8WUZ0 217 aaPredicted RBP14.15□□□□□ -0.14
VMP1-217ENST00000593168 EDAQ92838 391 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 BTBD6Q96KE9 485 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 TMEM209Q96SK2 561 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 OSBPL9Q96SU4 736 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 TTPALQ9BTX7 342 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 TRIM7Q9C029 511 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 CSNK1G1Q9HCP0 422 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 ALG13Q9NP73 1137 aaKnown RBP14.15□□□□□ -0.14
VMP1-217ENST00000593168 KRT82Q9NSB4 513 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 TMLHEQ9NVH6 421 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 RNF14Q9UBS8 474 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 CD207Q9UJ71 328 aa14.15□□□□□ -0.14
VMP1-217ENST00000593168 MRPL42Q9Y6G3 142 aaKnown RBP14.15□□□□□ -0.14
VMP1-217ENST00000593168 VWA8A3KMH1 1905 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 TMEM110-MUSTN1A8MSY1 372 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 GOLGA8SH3BPF8 625 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 RIOK3O14730 519 aaKnown RBP14.14□□□□□ -0.15
VMP1-217ENST00000593168 PAPSS1O43252 624 aaPredicted RBP14.14□□□□□ -0.15
VMP1-217ENST00000593168 BEST1O76090 585 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 DNAJB1P25685 340 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 PBX3P40426 434 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 SMARCB1Q12824 385 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 PIGHQ14442 188 aaPredicted RBP14.14□□□□□ -0.15
VMP1-217ENST00000593168 USP41Q3LFD5 358 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 IER5LQ5T953 404 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 OLFML1Q6UWY5 402 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 FAM183BPQ6ZVS7 135 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 ARCQ7LC44 396 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 CEP57Q86XR8 500 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 SPATA2LQ8IUW3 424 aaPredicted RBP14.14□□□□□ -0.15
VMP1-217ENST00000593168 FUBP3Q96I24 572 aaKnown RBP eCLIP14.14□□□□□ -0.15
VMP1-217ENST00000593168 PBKQ96KB5 322 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 MSLNLQ96KJ4 702 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 MCEEQ96PE7 176 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 SMOQ99835 787 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 AAASQ9NRG9 546 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 CHST7Q9NS84 486 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 TMEM59LQ9UK28 342 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 BACE2Q9Y5Z0 518 aa14.14□□□□□ -0.15
VMP1-217ENST00000593168 DDX3YO15523 660 aaKnown RBP14.13□□□□□ -0.15
VMP1-217ENST00000593168 SPOPO43791 374 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 GJB6O95452 261 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 BDNFP23560 247 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 CTNNA2P26232 953 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 RFC1P35251 1148 aaPredicted RBP14.13□□□□□ -0.15
VMP1-217ENST00000593168 TERF1P54274 439 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 MAP3K7CLP57077 242 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 ACAP1Q15027 740 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 CFAP221Q4G0U5 840 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 RTP2Q5QGT7 225 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 FAM102AQ5T9C2 384 aaPredicted RBP14.13□□□□□ -0.15
VMP1-217ENST00000593168 TAS1R1Q7RTX1 841 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 ADGRD2Q7Z7M1 963 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 SCUBE3Q8IX30 993 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 UBL4BQ8N7F7 174 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 NIPA2Q8N8Q9 360 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 COLGALT1Q8NBJ5 622 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 ZMIZ2Q8NF64 920 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 JOSD2Q8TAC2 188 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 CD101Q93033 1021 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms