RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 DMAC2Q9NW81 257 aa21.73■■□□□ 1.07
TRIM47-207ENST00000593089 CHORDC1Q9UHD1 332 aaPredicted RBP21.73■■□□□ 1.07
TRIM47-207ENST00000593089 PCDHGA5Q9Y5G8 931 aa21.73■■□□□ 1.07
TRIM47-207ENST00000593089 MYOFQ9NZM1 2061 aa21.73■■□□□ 1.07
TRIM47-207ENST00000593089 A0A1B0GVL5 298 aa21.72■■□□□ 1.07
TRIM47-207ENST00000593089 COCHO43405 550 aa21.72■■□□□ 1.07
TRIM47-207ENST00000593089 GBP1P32455 592 aa21.72■■□□□ 1.07
TRIM47-207ENST00000593089 SLC5A3P53794 718 aa21.72■■□□□ 1.07
TRIM47-207ENST00000593089 ORC1Q13415 861 aa21.72■■□□□ 1.07
TRIM47-207ENST00000593089 PLA2G2CQ5R387 149 aa21.72■■□□□ 1.07
TRIM47-207ENST00000593089 RHBDF2Q6PJF5 856 aa21.72■■□□□ 1.07
TRIM47-207ENST00000593089 ACOT1Q86TX2 421 aa21.72■■□□□ 1.07
TRIM47-207ENST00000593089 KIAA1958Q8N8K9 716 aa21.72■■□□□ 1.07
TRIM47-207ENST00000593089 OVCA2Q8WZ82 227 aa21.72■■□□□ 1.07
TRIM47-207ENST00000593089 SMARCD1Q96GM5 515 aa21.72■■□□□ 1.07
TRIM47-207ENST00000593089 KCTD10Q9H3F6 313 aa21.72■■□□□ 1.07
TRIM47-207ENST00000593089 DMAP1Q9NPF5 467 aaPredicted RBP21.72■■□□□ 1.07
TRIM47-207ENST00000593089 KRT82Q9NSB4 513 aa21.72■■□□□ 1.07
TRIM47-207ENST00000593089 MYH10P35580 1976 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 AP1G2O75843 785 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 RHOBTB1O94844 696 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 NR3C1P04150 777 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 PFKFB1P16118 471 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 LIMK1P53667 647 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 MESP2Q0VG99 397 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 HECTD3Q5T447 861 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 ANO7Q6IWH7 933 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 C12orf40Q86WS4 652 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 TTC30AQ86WT1 665 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 SLC9A9Q8IVB4 645 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 SFTPA1Q8IWL2 248 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 PNKPQ96T60 521 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 CCSER2Q9H7U1 834 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 VPS45Q9NRW7 570 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 MMP17Q9ULZ9 603 aa21.71■■□□□ 1.07
TRIM47-207ENST00000593089 PDXKO00764 312 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 TNFRSF10BO14763 440 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 ADH1CP00326 375 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 ADH5P11766 374 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 P4HA1P13674 534 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 CCDC130P13994 396 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 CREB5Q02930 508 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 KDSRQ06136 332 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 SGSM1Q2NKQ1 1148 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 CEP135Q66GS9 1140 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 TCEAL6Q6IPX3 200 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 FUKQ8N0W3 1084 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 DDX1Q92499 740 aaKnown RBP21.7■■□□□ 1.06
TRIM47-207ENST00000593089 TCEAL3Q969E4 200 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 ZFRQ96KR1 1074 aaKnown RBP21.7■■□□□ 1.06
TRIM47-207ENST00000593089 GMIPQ9P107 970 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 TBC1D14Q9P2M4 693 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 HMGXB4Q9UGU5 601 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 SH3BP1Q9Y3L3 701 aa21.7■■□□□ 1.06
TRIM47-207ENST00000593089 E2F8A0AVK6 867 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 KAT7O95251 611 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 APODP05090 189 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 TIE1P35590 1138 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 NDST1P52848 882 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 MRPS21P82921 87 aaKnown RBP21.69■■□□□ 1.06
TRIM47-207ENST00000593089 CRY1Q16526 586 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 ZACNQ401N2 412 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 USP39Q53GS9 565 aaKnown RBP21.69■■□□□ 1.06
TRIM47-207ENST00000593089 LY6G5CQ5SRR4 150 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 STPG1Q5TH74 334 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 SPOPLQ6IQ16 392 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 RASSF3Q86WH2 238 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 ALLCQ8N6M5 410 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 SLC2A14Q8TDB8 520 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 CHAMP1Q96JM3 812 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 SMOQ99835 787 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.69■■□□□ 1.06
TRIM47-207ENST00000593089 IL37Q9NZH6 218 aa21.69■■□□□ 1.06
TRIM47-207ENST00000593089 BEST1O76090 585 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 KLF8O95600 359 aaPredicted RBP21.68■■□□□ 1.06
TRIM47-207ENST00000593089 RPN1P04843 607 aaKnown RBP21.68■■□□□ 1.06
TRIM47-207ENST00000593089 IRF1P10914 325 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 CMA1P23946 247 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 EIF2DP41214 584 aaKnown RBP21.68■■□□□ 1.06
TRIM47-207ENST00000593089 PIK3CAP42336 1068 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 MAP3K7CLP57077 242 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 EMC10Q5UCC4 262 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 SNX30Q5VWJ9 437 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 TMEM92Q6UXU6 159 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 SV2AQ7L0J3 742 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 TXNDC5Q8NBS9 432 aaKnown RBP21.68■■□□□ 1.06
TRIM47-207ENST00000593089 ZMIZ2Q8NF64 920 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 MDGA1Q8NFP4 955 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 TMC2Q8TDI7 906 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 TMEM174Q8WUU8 243 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 CNOT6LQ96LI5 555 aaKnown RBP21.68■■□□□ 1.06
TRIM47-207ENST00000593089 NACA2Q9H009 215 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 ZDHHC4Q9NPG8 344 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 ARHGEF4Q9NR80 690 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 FAM49BQ9NUQ9 324 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 COMMD8Q9NX08 183 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 USP25Q9UHP3 1055 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 FRMD4BQ9Y2L6 1034 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 THADAQ6YHU6 1953 aa21.68■■□□□ 1.06
TRIM47-207ENST00000593089 CALUO43852 315 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms