RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 SLC47A2Q86VL8 602 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 MON1AQ86VX9 555 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 ZNF276Q8N554 614 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 KIAA1958Q8N8K9 716 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 STKLD1Q8NE28 680 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 SCAMP5Q8TAC9 235 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 EPS8L1Q8TE68 723 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 DDX1Q92499 740 aaKnown RBP10.25□□□□□ -0.77
TPM4-215ENST00000592138 BAP1Q92560 729 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 SMARCD2Q92925 531 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 SECISBP2LQ93073 1101 aaKnown RBP10.25□□□□□ -0.77
TPM4-215ENST00000592138 FBXO32Q969P5 355 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 ELSPBP1Q96BH3 223 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 NUCKS1Q9H1E3 243 aaKnown RBP10.25□□□□□ -0.77
TPM4-215ENST00000592138 EPHX3Q9H6B9 360 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 KIF9Q9HAQ2 790 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 NLRC4Q9NPP4 1024 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 CNGB3Q9NQW8 809 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 TLR8Q9NR97 1041 aaKnown RBP10.25□□□□□ -0.77
TPM4-215ENST00000592138 OBP2AQ9NY56 170 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 CEP83Q9Y592 693 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 DMDP11532 3685 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 ZDBF2Q9HCK1 2354 aa10.25□□□□□ -0.77
TPM4-215ENST00000592138 FBXO21O94952 628 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 LSM8O95777 96 aaKnown RBP10.24□□□□□ -0.77
TPM4-215ENST00000592138 OAS1P00973 400 aaKnown RBP10.24□□□□□ -0.77
TPM4-215ENST00000592138 PNMA6AP0CW24 399 aaPredicted RBP10.24□□□□□ -0.77
TPM4-215ENST00000592138 TCF3P15923 654 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 FERP16591 822 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 GJA1P17302 382 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 FCARP24071 287 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 SSTR3P32745 418 aaPredicted RBP10.24□□□□□ -0.77
TPM4-215ENST00000592138 CDH5P33151 784 aaPredicted RBP10.24□□□□□ -0.77
TPM4-215ENST00000592138 KRT9P35527 623 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 AVPR1AP37288 418 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 ACADSBP45954 432 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 CYP4F8P98187 520 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 TRIM14Q14142 442 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 PTPN21Q16825 1174 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 FAM78AQ5JUQ0 283 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 PMF1Q6P1K2 205 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 KLHDC10Q6PID8 442 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 TADA2BQ86TJ2 420 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 RNF135Q8IUD6 432 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 CMTM8Q8IZV2 173 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 ARHGAP18Q8N392 663 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 UBA3Q8TBC4 463 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 ZSCAN18Q8TBC5 510 aaPredicted RBP10.24□□□□□ -0.77
TPM4-215ENST00000592138 DEPDC1BQ8WUY9 529 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 ING5Q8WYH8 240 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 IRGQQ8WZA9 623 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 MCRS1Q96EZ8 462 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 ZSWIM3Q96MP5 696 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 CDK5RAP1Q96SZ6 601 aaKnown RBP10.24□□□□□ -0.77
TPM4-215ENST00000592138 SLC46A2Q9BY10 475 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 XPO4Q9C0E2 1151 aaKnown RBP10.24□□□□□ -0.77
TPM4-215ENST00000592138 SLITRK6Q9H5Y7 841 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 KCNK12Q9HB15 430 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 LRRC4Q9HBW1 653 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 ZFP14Q9HCL3 533 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 ACP6Q9NPH0 428 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 CLIC5Q9NZA1 410 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 SPTBN4Q9H254 2564 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 NOTCH4Q99466 2003 aa10.24□□□□□ -0.77
TPM4-215ENST00000592138 PATJQ8NI35 1801 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 TRAV19A0A0A6YYK7 116 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 TULP2O00295 520 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 SART1O43290 800 aaKnown RBP10.23□□□□□ -0.77
TPM4-215ENST00000592138 GFPT2O94808 682 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 ZBED1O96006 694 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 CALCAP01258 141 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 USP17L7P0C7H9 530 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 SP100P23497 879 aaPredicted RBP10.23□□□□□ -0.77
TPM4-215ENST00000592138 TKTL1P51854 596 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 SNX16P57768 344 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 SLC7A9P82251 487 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 CDR2Q01850 454 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 ADIGQ0VDE8 80 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 PDCLQ13371 301 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 TDGQ13569 410 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 HECTD3Q5T447 861 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 STXBP5Q5T5C0 1151 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 TXNDC8Q6A555 127 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 DENND1BQ6P3S1 775 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 PARM1Q6UWI2 310 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 TRIM72Q6ZMU5 477 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 BEND5Q7L4P6 421 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 TMEM110Q86TL2 294 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 NOP9Q86U38 636 aaKnown RBP10.23□□□□□ -0.77
TPM4-215ENST00000592138 ARID3BQ8IVW6 561 aaPredicted RBP10.23□□□□□ -0.77
TPM4-215ENST00000592138 UBALD2Q8IYN6 164 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 SIX6OS1Q8N1H7 587 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 MAB21L3Q8N8X9 362 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 TMEM35BQ8NCS4 154 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 SYN2Q92777 582 aaPredicted RBP10.23□□□□□ -0.77
TPM4-215ENST00000592138 FGF14Q92915 247 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 KHSRPQ92945 711 aaKnown RBP eCLIP10.23□□□□□ -0.77
TPM4-215ENST00000592138 NOX5Q96PH1 765 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 SLC4A5Q9BY07 1137 aa10.23□□□□□ -0.77
TPM4-215ENST00000592138 RBSNQ9H1K0 784 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms