RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 LXNQ9BS40 222 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 CDH19Q9H159 772 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 DHX33Q9H6R0 707 aaKnown RBP8.32□□□□□ -1.08
VMP1-213ENST00000591877 ATP6V0A4Q9HBG4 840 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 IFT122Q9HBG6 1241 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 CLDND1Q9NY35 253 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 FAM53CQ9NYF3 392 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 SUCLA2Q9P2R7 463 aaPredicted RBP8.32□□□□□ -1.08
VMP1-213ENST00000591877 TRHDEQ9UKU6 1024 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 TCFL5Q9UL49 500 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 LIMCH1Q9UPQ0 1083 aa8.32□□□□□ -1.08
VMP1-213ENST00000591877 A0A0U1RQF3 1178 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 ZNF891A8MT65 544 aaPredicted RBP8.31□□□□□ -1.08
VMP1-213ENST00000591877 FAM47E-STBD1D6RA91 191 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 GABRDO14764 452 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 TBX10O75333 385 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 FBXO21O94952 628 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 FKBP9O95302 570 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 TSPAN15O95858 294 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 SCGB1D2O95969 90 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 SOD2P04179 222 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 GSTM1P09488 218 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 ZSCAN20P17040 1043 aaPredicted RBP8.31□□□□□ -1.08
VMP1-213ENST00000591877 YWHABP31946 246 aaKnown RBP8.31□□□□□ -1.08
VMP1-213ENST00000591877 RAB27AP51159 221 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 ERVFC1P60507 584 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 GUCY1B3Q02153 619 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 CYP4A11Q02928 519 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 ADAM15Q13444 863 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 FKBP9P1Q75LS8 142 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 ZBTB46Q86UZ6 589 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 C11orf74Q86VG3 221 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 ZNF410Q86VK4 478 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 COLGALT1Q8NBJ5 622 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 TMEM143Q96AN5 459 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 LIN37Q96GY3 246 aaPredicted RBP8.31□□□□□ -1.08
VMP1-213ENST00000591877 CEP170P1Q96L14 293 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 SCLT1Q96NL6 688 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 PTCHD1Q96NR3 888 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 HSD17B14Q9BPX1 270 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 EIF2AK1Q9BQI3 630 aaKnown RBP8.31□□□□□ -1.08
VMP1-213ENST00000591877 GCOM2Q9BZD3 368 aaPredicted RBP8.31□□□□□ -1.08
VMP1-213ENST00000591877 TRIM8Q9BZR9 551 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 TMEM117Q9H0C3 514 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 TMEM60Q9H2L4 133 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 EPHX3Q9H6B9 360 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 MINDY3Q9H8M7 445 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 XPNPEP1Q9NQW7 623 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 PCDHA12Q9UN75 941 aa8.31□□□□□ -1.08
VMP1-213ENST00000591877 A0A087WWV3 80 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 DKC1O60832 514 aaKnown RBP eCLIP8.3□□□□□ -1.08
VMP1-213ENST00000591877 EIF5BO60841 1220 aaKnown RBP8.3□□□□□ -1.08
VMP1-213ENST00000591877 FGF18O76093 207 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 LYPLA2O95372 231 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 BAG4O95429 457 aaKnown RBP8.3□□□□□ -1.08
VMP1-213ENST00000591877 GLP2RO95838 553 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 PBX3P40426 434 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 ID4P47928 161 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 DNM2P50570 870 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 OXCT1P55809 520 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 CDC42EP1Q00587 391 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 LAMTOR4Q0VGL1 99 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 CALCRLQ16602 461 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 IFI16Q16666 785 aaKnown RBP8.3□□□□□ -1.08
VMP1-213ENST00000591877 SKOR2Q2VWA4 1001 aaPredicted RBP8.3□□□□□ -1.08
VMP1-213ENST00000591877 ATP13A4Q4VNC1 1196 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 XKR9Q5GH70 373 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 SPOUT1Q5T280 376 aaKnown RBP8.3□□□□□ -1.08
VMP1-213ENST00000591877 EP400NLQ6ZTU2 488 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 OVCH1Q7RTY7 1134 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 TMPRSS7Q7RTY8 843 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 TPH2Q8IWU9 490 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 RNF169Q8NCN4 708 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 PRPF31Q8WWY3 499 aaKnown RBP8.3□□□□□ -1.08
VMP1-213ENST00000591877 LPPQ93052 612 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 FBXW5Q969U6 566 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 MSLNLQ96KJ4 702 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 HRASLS5Q96KN8 279 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 NLRP4Q96MN2 994 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 LLPHQ9BRT6 129 aaKnown RBP8.3□□□□□ -1.08
VMP1-213ENST00000591877 TTC12Q9H892 705 aaPredicted RBP8.3□□□□□ -1.08
VMP1-213ENST00000591877 EMC7Q9NPA0 242 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 CHST12Q9NRB3 414 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 COQ6Q9Y2Z9 468 aa8.3□□□□□ -1.08
VMP1-213ENST00000591877 TDRD15B5MCY1 1934 aaKnown RBP8.29□□□□□ -1.08
VMP1-213ENST00000591877 SSU72P8A0A1W2PR75 194 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 CCDC66A2RUB6 948 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 PER2O15055 1255 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 MBTPS2O43462 519 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 NCK2O43639 380 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 B4GALT3O60512 393 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 NEMFO60524 1076 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 SRGAP2CP0DJJ0 459 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 LCP1P13796 627 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 LAG3P18627 525 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 SFPQP23246 707 aaKnown RBP eCLIP8.29□□□□□ -1.08
VMP1-213ENST00000591877 GRK2P25098 689 aa8.29□□□□□ -1.08
VMP1-213ENST00000591877 TPP2P29144 1249 aaPredicted RBP8.29□□□□□ -1.08
VMP1-213ENST00000591877 HOXA11P31270 313 aaPredicted RBP8.29□□□□□ -1.08
VMP1-213ENST00000591877 MCM7P33993 719 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms