RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 MAGEA9P43362 315 aa17.32■□□□□ 0.36
CIRBP-233ENST00000591622 RPS9P46781 194 aaKnown RBP17.32■□□□□ 0.36
CIRBP-233ENST00000591622 TUBP50607 506 aa17.32■□□□□ 0.36
CIRBP-233ENST00000591622 FZD5Q13467 585 aa17.32■□□□□ 0.36
CIRBP-233ENST00000591622 SGO2Q562F6 1265 aa17.32■□□□□ 0.36
CIRBP-233ENST00000591622 HECTD3Q5T447 861 aa17.32■□□□□ 0.36
CIRBP-233ENST00000591622 TRIM68Q6AZZ1 485 aa17.32■□□□□ 0.36
CIRBP-233ENST00000591622 TMEM270Q6UE05 265 aa17.32■□□□□ 0.36
CIRBP-233ENST00000591622 RBM43Q6ZSC3 357 aaKnown RBP17.32■□□□□ 0.36
CIRBP-233ENST00000591622 RRAGAQ7L523 313 aa17.32■□□□□ 0.36
CIRBP-233ENST00000591622 ARHGEF19Q8IW93 802 aa17.32■□□□□ 0.36
CIRBP-233ENST00000591622 ANKRD52Q8NB46 1076 aa17.32■□□□□ 0.36
CIRBP-233ENST00000591622 OSCP1Q8WVF1 389 aa17.32■□□□□ 0.36
CIRBP-233ENST00000591622 KAT5Q92993 513 aa17.32■□□□□ 0.36
CIRBP-233ENST00000591622 UBXN6Q9BZV1 441 aa17.32■□□□□ 0.36
CIRBP-233ENST00000591622 TLR8Q9NR97 1041 aaKnown RBP17.32■□□□□ 0.36
CIRBP-233ENST00000591622 DUS2Q9NX74 493 aaKnown RBP17.32■□□□□ 0.36
CIRBP-233ENST00000591622 SCML2Q9UQR0 700 aa17.32■□□□□ 0.36
CIRBP-233ENST00000591622 CPQQ9Y646 472 aa17.32■□□□□ 0.36
CIRBP-233ENST00000591622 LEFTY2O00292 366 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 COCHO43405 550 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 PAEPP09466 180 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 VDRP11473 427 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 ARSAP15289 507 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 CD19P15391 556 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 PGFP49763 221 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 KIF11P52732 1056 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 SLC8A3P57103 927 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 ANGPT1Q15389 498 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 TTC30AQ86WT1 665 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 FAM114A1Q8IWE2 563 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 CCSER2Q9H7U1 834 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 SMPD4Q9NXE4 827 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 TSPAN16Q9UKR8 245 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 PCDHB4Q9Y5E5 795 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 WNT6Q9Y6F9 365 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 MUC6Q6W4X9 2439 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 DENND4CQ5VZ89 1909 aa17.31■□□□□ 0.36
CIRBP-233ENST00000591622 TICRRQ7Z2Z1 1910 aa17.3■□□□□ 0.36
CIRBP-233ENST00000591622 OTOL1A6NHN0 477 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-233ENST00000591622 CYP26A1O43174 497 aa17.3■□□□□ 0.36
CIRBP-233ENST00000591622 MBD3O95983 291 aa17.3■□□□□ 0.36
CIRBP-233ENST00000591622 MBL2P11226 248 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-233ENST00000591622 MTIF2P46199 727 aaKnown RBP17.3■□□□□ 0.36
CIRBP-233ENST00000591622 IFNAR2P48551 515 aa17.3■□□□□ 0.36
CIRBP-233ENST00000591622 GOLGA7BQ2TAP0 167 aa17.3■□□□□ 0.36
CIRBP-233ENST00000591622 TXNDC11Q6PKC3 985 aa17.3■□□□□ 0.36
CIRBP-233ENST00000591622 C1orf210Q8IVY1 113 aa17.3■□□□□ 0.36
CIRBP-233ENST00000591622 KIAA1958Q8N8K9 716 aa17.3■□□□□ 0.36
CIRBP-233ENST00000591622 ATOH1Q92858 354 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-233ENST00000591622 HESX1Q9UBX0 185 aa17.3■□□□□ 0.36
CIRBP-233ENST00000591622 USP3Q9Y6I4 520 aa17.3■□□□□ 0.36
CIRBP-233ENST00000591622 RNF225M0QZC1 329 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-233ENST00000591622 O00370 1275 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 TLR5O60602 858 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 BCAT1P54687 386 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 EML3Q32P44 896 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 TRIM65Q6PJ69 517 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 CCDC186Q7Z3E2 898 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 PIGZQ86VD9 579 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 DDX42Q86XP3 938 aaKnown RBP eCLIP17.29■□□□□ 0.36
CIRBP-233ENST00000591622 CPA6Q8N4T0 437 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 RBBP8NLQ8NC74 664 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-233ENST00000591622 ATP2A3Q93084 1043 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 KREMEN1Q96MU8 473 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 CRACR2AQ9BSW2 395 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 NACA2Q9H009 215 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 LINC00597Q9H2U6 94 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 LMAN1LQ9HAT1 526 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 NMUR1Q9HB89 426 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 UBE2TQ9NPD8 197 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-233ENST00000591622 CYLDQ9NQC7 956 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 CFAP97Q9P2B7 532 aa17.29■□□□□ 0.36
CIRBP-233ENST00000591622 GTPBP10A4D1E9 387 aaKnown RBP17.28■□□□□ 0.36
CIRBP-233ENST00000591622 CHRNB1P11230 501 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 SLC9A1P19634 815 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 PSEN1P49768 467 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 ZNF132P52740 706 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 AMPD2Q01433 879 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 PDE4CQ08493 712 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 BST2Q10589 180 aaKnown RBP17.28■□□□□ 0.36
CIRBP-233ENST00000591622 PON2Q15165 354 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 MAN2A1Q16706 1144 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 RAB41Q5JT25 222 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 LCLAT1Q6UWP7 414 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 GBP6Q6ZN66 633 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 TFAP2BQ92481 460 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 CHFRQ96EP1 664 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 ZFRQ96KR1 1074 aaKnown RBP17.28■□□□□ 0.36
CIRBP-233ENST00000591622 ECT2Q9H8V3 914 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 FAM86C1Q9NVL1 165 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 SPATA6Q9NWH7 488 aaPredicted RBP17.28■□□□□ 0.36
CIRBP-233ENST00000591622 OSER1Q9NX31 292 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 CNTN6Q9UQ52 1028 aa17.28■□□□□ 0.36
CIRBP-233ENST00000591622 KIF26AQ9ULI4 1882 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-233ENST00000591622 A0A1W2PQH9 124 aa17.27■□□□□ 0.36
CIRBP-233ENST00000591622 E2F8A0AVK6 867 aa17.27■□□□□ 0.36
CIRBP-233ENST00000591622 TULP2O00295 520 aa17.27■□□□□ 0.36
CIRBP-233ENST00000591622 SLC9A3R1O14745 358 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-233ENST00000591622 XPO1O14980 1071 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms