RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 SCUBE3Q8IX30 993 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 GSTCDQ8NEC7 633 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 ACTL9Q8TC94 416 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 RAET1EQ8TD07 263 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 SLC2A14Q8TDB8 520 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 FAM172AQ8WUF8 416 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 KHSRPQ92945 711 aaKnown RBP eCLIP10.86□□□□□ -0.67
VPS25-206ENST00000591584 CAPNS2Q96L46 248 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 SERPINB12Q96P63 405 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 RNF157Q96PX1 679 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 GAD1Q99259 594 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 C11orf84Q9BUA3 381 aaPredicted RBP10.86□□□□□ -0.67
VPS25-206ENST00000591584 TRIM62Q9BVG3 475 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 FRMD8Q9BZ67 464 aaPredicted RBP10.86□□□□□ -0.67
VPS25-206ENST00000591584 CXCL16Q9H2A7 254 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 SEMA4AQ9H3S1 761 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 LRRC4Q9HBW1 653 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 CREBZFQ9NS37 354 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 FAM49BQ9NUQ9 324 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 RNF186Q9NXI6 227 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 RCOR3Q9P2K3 495 aaPredicted RBP10.86□□□□□ -0.67
VPS25-206ENST00000591584 KANSL3Q9P2N6 904 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 PCSK1NQ9UHG2 260 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 STAP1Q9ULZ2 295 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 SHOC2Q9UQ13 582 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 UTRNP46939 3433 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 SGK1O00141 431 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 RASGRF2O14827 1237 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 CYP11A1P05108 521 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 ABHD2P08910 425 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 FAM200BP0CF97 657 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 ODC1P11926 461 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 TSHRP16473 764 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 TYMPP19971 482 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 ADORA2BP29275 332 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 NOS2P35228 1153 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 MLH1P40692 756 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 MATKP42679 507 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 ZNF135P52742 658 aaPredicted RBP10.85□□□□□ -0.67
VPS25-206ENST00000591584 ACLYP53396 1101 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 GYS2P54840 703 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 MRPS5P82675 430 aaKnown RBP10.85□□□□□ -0.67
VPS25-206ENST00000591584 OTUD4Q01804 1114 aaKnown RBP10.85□□□□□ -0.67
VPS25-206ENST00000591584 CBLBQ13191 982 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 XRCC4Q13426 336 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 TUSC3Q13454 348 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 STAT4Q14765 748 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 LLGL1Q15334 1064 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 DPYSL2Q16555 572 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 UPP1Q16831 310 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 KCNT1Q5JUK3 1230 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 WSCD1Q658N2 575 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 MFSD5Q6N075 450 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 DCLRE1AQ6PJP8 1040 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 PPP1R21Q6ZMI0 780 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 AGMOQ6ZNB7 445 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 TAOK1Q7L7X3 1001 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 ANKS1BQ7Z6G8 1248 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 PIGZQ86VD9 579 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 OSTM1Q86WC4 334 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 THEM5Q8N1Q8 247 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 SCML4Q8N228 414 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 TMEM130Q8N3G9 435 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 RIBC1Q8N443 379 aaPredicted RBP10.85□□□□□ -0.67
VPS25-206ENST00000591584 SLAIN1Q8ND83 568 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 MYCBPAPQ8TBZ2 947 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 PPP1R13LQ8WUF5 828 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 RSPH1Q8WYR4 309 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 HSPH1Q92598 858 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 P3H4Q92791 437 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 TLCD1Q96CP7 247 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 FAF2Q96CS3 445 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 CFAP57Q96MR6 1250 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 SLC9A7Q96T83 725 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 ACBD6Q9BR61 282 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 FTHL17Q9BXU8 183 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 EPB41L4BQ9H329 900 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 DPEP3Q9H4B8 488 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 PRDM10Q9NQV6 1147 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 CNGB3Q9NQW8 809 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 KLHL11Q9NVR0 708 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 DDX43Q9NXZ2 648 aaKnown RBP10.85□□□□□ -0.67
VPS25-206ENST00000591584 NME7Q9Y5B8 376 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 MGAMO43451 1857 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 CASP8AP2Q9UKL3 1982 aa10.85□□□□□ -0.67
VPS25-206ENST00000591584 GRIN2DO15399 1336 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 C9IYK1 514 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 APOL1O14791 398 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 TP73O15350 636 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 RGS16O15492 202 aaPredicted RBP10.84□□□□□ -0.67
VPS25-206ENST00000591584 DAB1O75553 588 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 CTSHP09668 335 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 CCDC130P13994 396 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 CD52P31358 61 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 EIF3EP60228 445 aaKnown RBP10.84□□□□□ -0.67
VPS25-206ENST00000591584 YWHAZP63104 245 aaKnown RBP10.84□□□□□ -0.67
VPS25-206ENST00000591584 PPP2R2AP63151 447 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 TRIM32Q13049 653 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 DPYSL3Q14195 570 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 LPIN1Q14693 890 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms