RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 PMM2O15305 246 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 P4HA2O15460 535 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 OAS1P00973 400 aaKnown RBP12.76□□□□□ -0.37
TPM4-212ENST00000590180 AFPP02771 609 aaKnown RBP12.76□□□□□ -0.37
TPM4-212ENST00000590180 SP9P0CG40 484 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 CHRNB1P11230 501 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 SLC8A3P57103 927 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 MTAPQ13126 283 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 LRRC32Q14392 662 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 DGKKQ5KSL6 1271 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 CLEC17AQ6ZS10 378 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 RRAGAQ7L523 313 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 TRIM59Q8IWR1 403 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 ZNF687Q8N1G0 1237 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 PPM1KQ8N3J5 372 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 CPA6Q8N4T0 437 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 FAM124BQ9H5Z6 455 aaPredicted RBP12.76□□□□□ -0.37
TPM4-212ENST00000590180 CCSER2Q9H7U1 834 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 ECT2Q9H8V3 914 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 TLR8Q9NR97 1041 aaKnown RBP12.76□□□□□ -0.37
TPM4-212ENST00000590180 RBM12Q9NTZ6 932 aaKnown RBP12.76□□□□□ -0.37
TPM4-212ENST00000590180 CFAP97Q9P2B7 532 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 DENND4CQ5VZ89 1909 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 MYH10P35580 1976 aa12.76□□□□□ -0.37
TPM4-212ENST00000590180 RIF1Q5UIP0 2472 aaKnown RBP12.76□□□□□ -0.37
TPM4-212ENST00000590180 HHLA1C9JL84 531 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 GOLGA6L22H0YM25 854 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 SCAMP3O14828 347 aaKnown RBP12.75□□□□□ -0.37
TPM4-212ENST00000590180 COCHO43405 550 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 TCF3P15923 654 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 PTPRDP23468 1912 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 HOXD11P31277 338 aaPredicted RBP12.75□□□□□ -0.37
TPM4-212ENST00000590180 GALK1P51570 392 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 ZXDBP98169 803 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 GRSF1Q12849 480 aaKnown RBP eCLIP12.75□□□□□ -0.37
TPM4-212ENST00000590180 USP4Q13107 963 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 SGO2Q562F6 1265 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 SNX30Q5VWJ9 437 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 ARHGAP17Q68EM7 881 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 TMEM270Q6UE05 265 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 GPRIN1Q7Z2K8 1008 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 ANKRD52Q8NB46 1076 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 ATP2A3Q93084 1043 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 EXOC4Q96A65 974 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 CHRDQ9H2X0 955 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 HESX1Q9UBX0 185 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 KIAA1257Q9ULG3 409 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 SCML2Q9UQR0 700 aa12.75□□□□□ -0.37
TPM4-212ENST00000590180 GREB1Q4ZG55 1949 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 TICRRQ7Z2Z1 1910 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 NUP210Q8TEM1 1887 aaPredicted RBP12.74□□□□□ -0.37
TPM4-212ENST00000590180 FAM92AA1XBS5 289 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 SLC9A3R1O14745 358 aaPredicted RBP12.74□□□□□ -0.37
TPM4-212ENST00000590180 TLR5O60602 858 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 OLFM2O95897 454 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 TBX18O95935 607 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 ZDHHC11BP0C7U3 371 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 VDRP11473 427 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 GJA4P35212 333 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 ATP5C1P36542 298 aaKnown RBP12.74□□□□□ -0.37
TPM4-212ENST00000590180 NBL1P41271 181 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 MTIF2P46199 727 aaKnown RBP12.74□□□□□ -0.37
TPM4-212ENST00000590180 PGFP49763 221 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 KIF11P52732 1056 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 MARSP56192 900 aaKnown RBP12.74□□□□□ -0.37
TPM4-212ENST00000590180 GOLGA7BQ2TAP0 167 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 EML3Q32P44 896 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 TSSK4Q6SA08 328 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 DDX42Q86XP3 938 aaKnown RBP eCLIP12.74□□□□□ -0.37
TPM4-212ENST00000590180 MAML2Q8IZL2 1156 aaPredicted RBP12.74□□□□□ -0.37
TPM4-212ENST00000590180 ADGRG2Q8IZP9 1017 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 LMO3Q8TAP4 145 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 UBA3Q8TBC4 463 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 KAT5Q92993 513 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 CNOT6LQ96LI5 555 aaKnown RBP12.74□□□□□ -0.37
TPM4-212ENST00000590180 MED15Q96RN5 788 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 CRACR2AQ9BSW2 395 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 UBXN6Q9BZV1 441 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 PNPLA8Q9NP80 782 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 DACH1Q9UI36 760 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 FBXO4Q9UKT5 387 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 SH3BP1Q9Y3L3 701 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 R4GN57 208 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 ANAPC1Q9H1A4 1944 aa12.74□□□□□ -0.37
TPM4-212ENST00000590180 MIA3Q5JRA6 1907 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 A0A1W2PQH9 124 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 TRDMT1O14717 391 aaKnown RBP12.73□□□□□ -0.37
TPM4-212ENST00000590180 CYP26A1O43174 497 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 NFATC1O95644 943 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 IRF1P10914 325 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 RALAP11233 206 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 RARGP13631 454 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 CXCL12P48061 93 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 TUBP50607 506 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 PIGZQ86VD9 579 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 ARHGEF19Q8IW93 802 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 ATRIPQ8WXE1 791 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 NKD2Q969F2 451 aaPredicted RBP12.73□□□□□ -0.37
TPM4-212ENST00000590180 P2RY13Q9BPV8 354 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 INTS2Q9H0H0 1204 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms