RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 TRIM9Q9C026 710 aa16.1■□□□□ 0.17
SF3A2-204ENST00000589118 CHORDC1Q9UHD1 332 aaPredicted RBP16.1■□□□□ 0.17
SF3A2-204ENST00000589118 ITGA11Q9UKX5 1188 aa16.1■□□□□ 0.17
SF3A2-204ENST00000589118 IGHV1OR15-9A0A0B4J2B8 117 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 UPK3BL1B0FP48 263 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 UPK3BL2E5RIL1 263 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 ARHGAP33O14559 1287 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 OLFM2O95897 454 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 OAS1P00973 400 aaKnown RBP16.09■□□□□ 0.17
SF3A2-204ENST00000589118 SCP2P22307 547 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 ANXA13P27216 316 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 TRIP6Q15654 476 aaKnown RBP16.09■□□□□ 0.17
SF3A2-204ENST00000589118 C8orf34Q49A92 452 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 C4orf50Q6ZRC1 276 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 TMEM25Q86YD3 366 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 ZNF513Q8N8E2 541 aaPredicted RBP16.09■□□□□ 0.17
SF3A2-204ENST00000589118 KRI1Q8N9T8 703 aaKnown RBP16.09■□□□□ 0.17
SF3A2-204ENST00000589118 TRIML1Q8N9V2 468 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 HPDLQ96IR7 371 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 ACCSQ96QU6 501 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 TTLL2Q9BWV7 592 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 DPEP3Q9H4B8 488 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 CDH9Q9ULB4 789 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 RAD54BQ9Y620 910 aa16.09■□□□□ 0.17
SF3A2-204ENST00000589118 A0A1W2PQF6 199 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 AP5Z1O43299 807 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 TULP3O75386 442 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 PRPF6O94906 941 aaKnown RBP16.08■□□□□ 0.16
SF3A2-204ENST00000589118 GCNT3O95395 438 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 TMEM191BP0C7N4 346 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 IRF1P10914 325 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 GJB2P29033 226 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 TNFRSF4P43489 277 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 POU5F1Q01860 360 aaKnown RBP16.08■□□□□ 0.16
SF3A2-204ENST00000589118 C10orf76Q5T2E6 689 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 L1TD1Q5T7N2 865 aaKnown RBP16.08■□□□□ 0.16
SF3A2-204ENST00000589118 EGFLAMQ63HQ2 1017 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 VSTM1Q6UX27 236 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 LIMS2Q7Z4I7 341 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 SLCO6A1Q86UG4 719 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 BBS7Q8IWZ6 715 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 DNAJC19Q96DA6 116 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 ZFRQ96KR1 1074 aaKnown RBP16.08■□□□□ 0.16
SF3A2-204ENST00000589118 HSPA12BQ96MM6 686 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 MMS19Q96T76 1030 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 ZNF518BQ9C0D4 1074 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 INTS13Q9NVM9 706 aa16.08■□□□□ 0.16
SF3A2-204ENST00000589118 FREM2Q5SZK8 3169 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 CELSR3Q9NYQ7 3312 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 H3BQV1 296 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 COCHO43405 550 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 ADH1CP00326 375 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 CST3P01034 146 aaPredicted RBP16.07■□□□□ 0.16
SF3A2-204ENST00000589118 FTH1P19P0C7X4 201 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 HOXB2P14652 356 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 PGFP49763 221 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 ANO4Q32M45 955 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 ETFBKMTQ8IXQ9 262 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 RGL4Q8IZJ4 473 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 SYCP3Q8IZU3 236 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 GLIS3Q8NEA6 775 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 MYCBPAPQ8TBZ2 947 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 ELMO3Q96BJ8 720 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 CRELD1Q96HD1 420 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 KCNK16Q96T55 309 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 CCSER2Q9H7U1 834 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 RAXQ9Y2V3 346 aa16.07■□□□□ 0.16
SF3A2-204ENST00000589118 WASH3PC4AMC7 463 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 H0Y626 953 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 SLC9A3R1O14745 358 aaPredicted RBP16.06■□□□□ 0.16
SF3A2-204ENST00000589118 GJB3O75712 270 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 TRIM16O95361 564 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 NDUFV2P19404 249 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 WARSP23381 471 aaKnown RBP16.06■□□□□ 0.16
SF3A2-204ENST00000589118 LONP1P36776 959 aaKnown RBP16.06■□□□□ 0.16
SF3A2-204ENST00000589118 EIF2DP41214 584 aaKnown RBP16.06■□□□□ 0.16
SF3A2-204ENST00000589118 PDE6CP51160 858 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 GAD2Q05329 585 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 BYSLQ13895 437 aaKnown RBP16.06■□□□□ 0.16
SF3A2-204ENST00000589118 SF3A1Q15459 793 aaKnown RBP16.06■□□□□ 0.16
SF3A2-204ENST00000589118 PLEKHG6Q3KR16 790 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 SPDYCQ5MJ68 293 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 TDRD10Q5VZ19 366 aaKnown RBP16.06■□□□□ 0.16
SF3A2-204ENST00000589118 CBWD2Q8IUF1 395 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 SCAMP5Q8TAC9 235 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 CEP76Q8TAP6 659 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 HPS3Q969F9 1004 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 HVCN1Q96D96 273 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 C8orf48Q96LL4 319 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 B3GNT5Q9BYG0 378 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 PANK2Q9BZ23 570 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 IL21RQ9HBE5 538 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 CD248Q9HCU0 757 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 DNAAF2Q9NVR5 837 aaKnown RBP16.06■□□□□ 0.16
SF3A2-204ENST00000589118 PCDHB9Q9Y5E1 797 aa16.06■□□□□ 0.16
SF3A2-204ENST00000589118 SETXQ7Z333 2677 aaKnown RBP16.06■□□□□ 0.16
SF3A2-204ENST00000589118 SMG1Q96Q15 3661 aaKnown RBP16.05■□□□□ 0.16
SF3A2-204ENST00000589118 SLC26A4O43511 780 aa16.05■□□□□ 0.16
SF3A2-204ENST00000589118 LDHAP00338 332 aaKnown RBP16.05■□□□□ 0.16
SF3A2-204ENST00000589118 IDEP14735 1019 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms