RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 ACCSQ96QU6 501 aa16.3■□□□□ 0.2
IFT20-216ENST00000588477 PCIF1Q9H4Z3 704 aa16.3■□□□□ 0.2
IFT20-216ENST00000588477 GPSM3Q9Y4H4 160 aa16.3■□□□□ 0.2
IFT20-216ENST00000588477 TBC1D3BA6NDS4 549 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.29■□□□□ 0.2
IFT20-216ENST00000588477 F8VP50 259 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 ARHGAP33O14559 1287 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 TRIM66O15016 1216 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 GCNT3O95395 438 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 OAS1P00973 400 aaKnown RBP16.29■□□□□ 0.2
IFT20-216ENST00000588477 GARTP22102 1010 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 NOP14P78316 857 aaKnown RBP16.29■□□□□ 0.2
IFT20-216ENST00000588477 GAD2Q05329 585 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 SCAPQ12770 1279 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 IFRD2Q12894 506 aaPredicted RBP16.29■□□□□ 0.2
IFT20-216ENST00000588477 TAF10Q12962 218 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 TRIP6Q15654 476 aaKnown RBP16.29■□□□□ 0.2
IFT20-216ENST00000588477 HS2ST1Q7LGA3 356 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 RABEPKQ7Z6M1 372 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 SYCP3Q8IZU3 236 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 HPDLQ96IR7 371 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 ANKRD36BP1Q96IX9 119 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 KIF2CQ99661 725 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 TBC1D14Q9P2M4 693 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 PCDHB9Q9Y5E1 797 aa16.29■□□□□ 0.2
IFT20-216ENST00000588477 SHROOM3Q8TF72 1996 aa16.28■□□□□ 0.2
IFT20-216ENST00000588477 SH3BP5O60239 455 aa16.28■□□□□ 0.2
IFT20-216ENST00000588477 SYPP08247 313 aa16.28■□□□□ 0.2
IFT20-216ENST00000588477 WASP42768 502 aa16.28■□□□□ 0.2
IFT20-216ENST00000588477 HNRNPDQ14103 355 aaKnown RBP16.28■□□□□ 0.2
IFT20-216ENST00000588477 MDH1BQ5I0G3 518 aa16.28■□□□□ 0.2
IFT20-216ENST00000588477 TDRD10Q5VZ19 366 aaKnown RBP16.28■□□□□ 0.2
IFT20-216ENST00000588477 LIMS2Q7Z4I7 341 aa16.28■□□□□ 0.2
IFT20-216ENST00000588477 DDX42Q86XP3 938 aaKnown RBP eCLIP16.28■□□□□ 0.2
IFT20-216ENST00000588477 SLC41A1Q8IVJ1 513 aa16.28■□□□□ 0.2
IFT20-216ENST00000588477 MYCBPAPQ8TBZ2 947 aa16.28■□□□□ 0.2
IFT20-216ENST00000588477 SLITRK1Q96PX8 696 aa16.28■□□□□ 0.2
IFT20-216ENST00000588477 MMS19Q96T76 1030 aa16.28■□□□□ 0.2
IFT20-216ENST00000588477 CBWD1Q9BRT8 395 aa16.28■□□□□ 0.2
IFT20-216ENST00000588477 DNAAF2Q9NVR5 837 aaKnown RBP16.28■□□□□ 0.2
IFT20-216ENST00000588477 CALCOCO1Q9P1Z2 691 aa16.28■□□□□ 0.2
IFT20-216ENST00000588477 SEL1LQ9UBV2 794 aa16.28■□□□□ 0.2
IFT20-216ENST00000588477 IGHV1OR15-9A0A0B4J2B8 117 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 E2F8A0AVK6 867 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 HOXB2P14652 356 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 WARSP23381 471 aaKnown RBP16.27■□□□□ 0.2
IFT20-216ENST00000588477 GJB2P29033 226 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 CASP5P51878 434 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 COL28A1Q2UY09 1125 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 SOWAHCQ53LP3 525 aaPredicted RBP16.27■□□□□ 0.2
IFT20-216ENST00000588477 BTBD8Q5XKL5 378 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 TRMT11Q7Z4G4 463 aaKnown RBP16.27■□□□□ 0.2
IFT20-216ENST00000588477 PDZD3Q86UT5 571 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 PNPLA1Q8N8W4 532 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 OR5B17Q8NGF7 314 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 ERLEC1Q96DZ1 483 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 EPSTI1Q96J88 318 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 C8orf48Q96LL4 319 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 INTS13Q9NVM9 706 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 DEC1Q9P2X7 70 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 PCDHB13Q9Y5F0 798 aa16.27■□□□□ 0.2
IFT20-216ENST00000588477 TMEM131Q92545 1883 aa16.27■□□□□ 0.19
IFT20-216ENST00000588477 PTPRJQ12913 1337 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 A0A1W2PQD8 194 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 TULP3O75386 442 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 TNNC2P02585 160 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 GAP43P17677 238 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 NTSR1P30989 418 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 CACNA2D1P54289 1103 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 SF3A1Q15459 793 aaKnown RBP16.26■□□□□ 0.19
IFT20-216ENST00000588477 ANO4Q32M45 955 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 PLEKHG6Q3KR16 790 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 PREPLQ4J6C6 727 aaPredicted RBP16.26■□□□□ 0.19
IFT20-216ENST00000588477 C10orf76Q5T2E6 689 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 NUDT18Q6ZVK8 323 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 USP49Q70CQ1 688 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 ETFBKMTQ8IXQ9 262 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 RGL4Q8IZJ4 473 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 GPD1LQ8N335 351 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 TRIML1Q8N9V2 468 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 KCNV2Q8TDN2 545 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 ADAMTS14Q8WXS8 1223 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 DNAJC19Q96DA6 116 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 OTUB2Q96DC9 234 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 HSPA12BQ96MM6 686 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 MRPL45Q9BRJ2 306 aaKnown RBP16.26■□□□□ 0.19
IFT20-216ENST00000588477 TMEM30AQ9NV96 361 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 HCN2Q9UL51 889 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 CYP8B1Q9UNU6 501 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 SH3BP1Q9Y3L3 701 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 NME7Q9Y5B8 376 aa16.26■□□□□ 0.19
IFT20-216ENST00000588477 TRIM24O15164 1050 aa16.25■□□□□ 0.19
IFT20-216ENST00000588477 ZNF217O75362 1048 aa16.25■□□□□ 0.19
IFT20-216ENST00000588477 GJB3O75712 270 aa16.25■□□□□ 0.19
IFT20-216ENST00000588477 FTH1P19P0C7X4 201 aa16.25■□□□□ 0.19
IFT20-216ENST00000588477 GNL1P36915 607 aaPredicted RBP16.25■□□□□ 0.19
IFT20-216ENST00000588477 SLC14A1Q13336 389 aa16.25■□□□□ 0.19
IFT20-216ENST00000588477 MIB1Q86YT6 1006 aa16.25■□□□□ 0.19
IFT20-216ENST00000588477 TERB1Q8NA31 727 aa16.25■□□□□ 0.19
IFT20-216ENST00000588477 ZFRQ96KR1 1074 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms