RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 SPPL2BQ8TCT7 592 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 ZNF516Q92618 1163 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 SRRTQ9BXP5 876 aaKnown RBP16.71■□□□□ 0.27
NCLN-203ENST00000587740 ECT2Q9H8V3 914 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 KIF9Q9HAQ2 790 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 ANO10Q9NW15 660 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 ABI2Q9NYB9 513 aaPredicted RBP16.71■□□□□ 0.27
NCLN-203ENST00000587740 SIX4Q9UIU6 781 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 ANKRD11Q6UB99 2663 aaPredicted RBP16.7■□□□□ 0.26
NCLN-203ENST00000587740 KPNA7A9QM74 516 aa16.7■□□□□ 0.26
NCLN-203ENST00000587740 PATE3B3GLJ2 98 aa16.7■□□□□ 0.26
NCLN-203ENST00000587740 DDX6P26196 483 aaKnown RBP eCLIP16.7■□□□□ 0.262e-8■■■■■ 29
NCLN-203ENST00000587740 ERCC5P28715 1186 aaPredicted RBP16.7■□□□□ 0.26
NCLN-203ENST00000587740 MYO1EQ12965 1108 aa16.7■□□□□ 0.26
NCLN-203ENST00000587740 PDGFRLQ15198 375 aa16.7■□□□□ 0.26
NCLN-203ENST00000587740 TPD52L1Q16890 204 aaPredicted RBP16.7■□□□□ 0.26
NCLN-203ENST00000587740 CCDC40Q4G0X9 1142 aa16.7■□□□□ 0.26
NCLN-203ENST00000587740 SDHAF4Q5VUM1 108 aa16.7■□□□□ 0.26
NCLN-203ENST00000587740 PMS2CLQ68D20 193 aa16.7■□□□□ 0.26
NCLN-203ENST00000587740 CXorf38Q8TB03 319 aa16.7■□□□□ 0.26
NCLN-203ENST00000587740 C2orf15Q8WU43 125 aaKnown RBP16.7■□□□□ 0.26
NCLN-203ENST00000587740 GATA6Q92908 595 aa16.7■□□□□ 0.26
NCLN-203ENST00000587740 SLC22A12Q96S37 553 aa16.7■□□□□ 0.26
NCLN-203ENST00000587740 ADAM33Q9BZ11 813 aa16.7■□□□□ 0.26
NCLN-203ENST00000587740 METTL14Q9HCE5 456 aaKnown RBP16.7■□□□□ 0.26
NCLN-203ENST00000587740 ARMCX3Q9UH62 379 aaPredicted RBP16.7■□□□□ 0.26
NCLN-203ENST00000587740 DSEQ9UL01 958 aa16.7■□□□□ 0.26
NCLN-203ENST00000587740 PTPRDP23468 1912 aa16.7■□□□□ 0.26
NCLN-203ENST00000587740 PI4KAP42356 2102 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 ANAPC1Q9H1A4 1944 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 STX10O60499 249 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 LETM1O95202 739 aaPredicted RBP16.69■□□□□ 0.26
NCLN-203ENST00000587740 GNA14O95837 355 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 CST3P01034 146 aaPredicted RBP16.69■□□□□ 0.26
NCLN-203ENST00000587740 C4BPAP04003 597 aaKnown RBP16.69■□□□□ 0.26
NCLN-203ENST00000587740 TRIM49P0CI25 452 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 TRIM49CP0CI26 452 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 BCKDHBP21953 392 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 GBP1P32455 592 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 DGKEP52429 567 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 AMPD2Q01433 879 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 SMARCB1Q12824 385 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 ZNF268Q14587 947 aaPredicted RBP16.69■□□□□ 0.26
NCLN-203ENST00000587740 MTF1Q14872 753 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 STX1AQ16623 288 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 TCERG1LQ5VWI1 586 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 DAB2IPQ5VWQ8 1189 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 CC2D1AQ6P1N0 951 aaPredicted RBP16.69■□□□□ 0.26
NCLN-203ENST00000587740 THEM5Q8N1Q8 247 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 CD101Q93033 1021 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 HPDLQ96IR7 371 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 CYP2S1Q96SQ9 504 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 SCNM1Q9BWG6 230 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 TPSD1Q9BZJ3 242 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 MMRN2Q9H8L6 949 aa16.69■□□□□ 0.26
NCLN-203ENST00000587740 MAGED2Q9UNF1 606 aaPredicted RBP16.69■□□□□ 0.26
NCLN-203ENST00000587740 NBEAQ8NFP9 2946 aa16.68■□□□□ 0.26
NCLN-203ENST00000587740 SOBPA7XYQ1 873 aa16.68■□□□□ 0.26
NCLN-203ENST00000587740 CEACAM1P13688 526 aa16.68■□□□□ 0.26
NCLN-203ENST00000587740 CSRP1P21291 193 aaKnown RBP16.68■□□□□ 0.26
NCLN-203ENST00000587740 GTF2H1P32780 548 aa16.68■□□□□ 0.26
NCLN-203ENST00000587740 MCCD1P59942 119 aaPredicted RBP16.68■□□□□ 0.26
NCLN-203ENST00000587740 IRX4P78413 519 aa16.68■□□□□ 0.26
NCLN-203ENST00000587740 ZNF77Q15935 545 aa16.68■□□□□ 0.26
NCLN-203ENST00000587740 DCAF17Q5H9S7 520 aaPredicted RBP16.68■□□□□ 0.26
NCLN-203ENST00000587740 C1orf220Q5T0J3 134 aa16.68■□□□□ 0.26
NCLN-203ENST00000587740 TDRD10Q5VZ19 366 aaKnown RBP16.68■□□□□ 0.26
NCLN-203ENST00000587740 SCARA3Q6AZY7 606 aa16.68■□□□□ 0.26
NCLN-203ENST00000587740 SV2AQ7L0J3 742 aa16.68■□□□□ 0.26
NCLN-203ENST00000587740 METTL23Q86XA0 190 aa16.68■□□□□ 0.26
NCLN-203ENST00000587740 OSCP1Q8WVF1 389 aa16.68■□□□□ 0.26
NCLN-203ENST00000587740 MRPS31Q92665 395 aaKnown RBP16.68■□□□□ 0.26
NCLN-203ENST00000587740 PI4K2AQ9BTU6 479 aa16.68■□□□□ 0.26
NCLN-203ENST00000587740 DUS2Q9NX74 493 aaKnown RBP16.68■□□□□ 0.26
NCLN-203ENST00000587740 WNT6Q9Y6F9 365 aa16.68■□□□□ 0.26
NCLN-203ENST00000587740 SRRM3A6NNA2 597 aaPredicted RBP16.67■□□□□ 0.26
NCLN-203ENST00000587740 KHNYNO15037 678 aaKnown RBP16.67■□□□□ 0.26
NCLN-203ENST00000587740 HUS1O60921 280 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 CLSTN1O94985 981 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 CSH1P0DML2 217 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 CSH2P0DML3 217 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 ATICP31939 592 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 GCLMP48507 274 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 PPP3CAQ08209 521 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 NCOA4Q13772 614 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 DDR2Q16832 855 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 EML3Q32P44 896 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 ZACNQ401N2 412 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 RASSF3Q86WH2 238 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 DCP1BQ8IZD4 617 aaKnown RBP16.67■□□□□ 0.26
NCLN-203ENST00000587740 CPA6Q8N4T0 437 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 ACDQ96AP0 544 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 MED15Q96RN5 788 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 LINC00597Q9H2U6 94 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 TMEM8AQ9HCN3 771 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 TMEM9BQ9NQ34 198 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 GDAP2Q9NXN4 497 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 PCDHB5Q9Y5E4 795 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 SNX9Q9Y5X1 595 aa16.67■□□□□ 0.26
NCLN-203ENST00000587740 K7EQS6 105 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms