RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ATG4AQ8WYN0 398 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 HSPH1Q92598 858 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 FAM149B1Q96BN6 582 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 NCAPGQ9BPX3 1015 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 NRDE2Q9H7Z3 1164 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 CHST7Q9NS84 486 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 TBX21Q9UL17 535 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 hCG_1818297A0A087WSY0 165 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 BHMG1C9JSJ3 638 aaPredicted RBP20.78■□□□□ 0.92
TRIM47-204ENST00000587339 HSF2BPO75031 334 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 PTGIRP43119 386 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 KCNJ1P48048 391 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 CACNA2D1P54289 1103 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 ADCY1Q08828 1119 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 SNX1Q13596 522 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 HLTFQ14527 1009 aaKnown RBP eCLIP20.78■□□□□ 0.92
TRIM47-204ENST00000587339 CASP8Q14790 479 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 ANKLE1Q8NAG6 615 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 KCTD6Q8NC69 237 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 ZMIZ2Q8NF64 920 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 CMASQ8NFW8 434 aaPredicted RBP20.78■□□□□ 0.92
TRIM47-204ENST00000587339 SEC14L1Q92503 715 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 PEBP4Q96S96 227 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 TMEM209Q96SK2 561 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 PKMYT1Q99640 499 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 ERP44Q9BS26 406 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 CSNK1G1Q9HCP0 422 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 TMEM39AQ9NV64 488 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 R3HDM2Q9Y2K5 976 aaKnown RBP20.78■□□□□ 0.92
TRIM47-204ENST00000587339 SCN5AQ14524 2016 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 C3orf70A6NLC5 250 aaPredicted RBP20.77■□□□□ 0.92
TRIM47-204ENST00000587339 NRP1O14786 923 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 DAPK3O43293 454 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 ALDH2P05091 517 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 KDELR1P24390 212 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 NDUFV1P49821 464 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 ADCY2Q08462 1091 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 PKN2Q16513 984 aaKnown RBP20.77■□□□□ 0.92
TRIM47-204ENST00000587339 CCNG2Q16589 344 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 RAB6CQ53S08 254 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 SCYL2Q6P3W7 929 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 LRRTM3Q86VH5 581 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 DDX42Q86XP3 938 aaKnown RBP eCLIP20.77■□□□□ 0.92
TRIM47-204ENST00000587339 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.77■□□□□ 0.92
TRIM47-204ENST00000587339 MRPL9Q9BYD2 267 aaKnown RBP20.77■□□□□ 0.92
TRIM47-204ENST00000587339 RHOBTB2Q9BYZ6 727 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 UBXN6Q9BZV1 441 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 DCLK3Q9C098 648 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 RAB6CQ9H0N0 254 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 TMEM30AQ9NV96 361 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 TMLHEQ9NVH6 421 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.77■□□□□ 0.92
TRIM47-204ENST00000587339 ADAM28Q9UKQ2 775 aa20.77■□□□□ 0.92
TRIM47-204ENST00000587339 MAP2K7O14733 419 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 ECEL1O95672 775 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 HSPA8P11142 646 aaKnown RBP20.76■□□□□ 0.91
TRIM47-204ENST00000587339 BDNFP23560 247 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 YWHAZP63104 245 aaKnown RBP20.76■□□□□ 0.91
TRIM47-204ENST00000587339 NDRG1Q92597 394 aaKnown RBP20.76■□□□□ 0.91
TRIM47-204ENST00000587339 TRIM31Q9BZY9 425 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 DPH5Q9H2P9 285 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 FEZ2Q9UHY8 353 aaPredicted RBP20.76■□□□□ 0.91
TRIM47-204ENST00000587339 EFR3BQ9Y2G0 817 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 FBXO21O94952 628 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 OAZ2O95190 189 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 MATKP42679 507 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 RABGGTBP53611 331 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 HDAC4P56524 1084 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 BOLA3Q53S33 107 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 RAB41Q5JT25 222 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 CYP4V2Q6ZWL3 525 aaPredicted RBP20.76■□□□□ 0.91
TRIM47-204ENST00000587339 SND1Q7KZF4 910 aaKnown RBP eCLIP20.76■□□□□ 0.91
TRIM47-204ENST00000587339 SLCO2A1Q92959 643 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 PAWRQ96IZ0 340 aaKnown RBP20.76■□□□□ 0.91
TRIM47-204ENST00000587339 C11orf84Q9BUA3 381 aaPredicted RBP20.76■□□□□ 0.91
TRIM47-204ENST00000587339 DDX23Q9BUQ8 820 aaKnown RBP20.76■□□□□ 0.91
TRIM47-204ENST00000587339 CNGB3Q9NQW8 809 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 FAM114A2Q9NRY5 505 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.76■□□□□ 0.91
TRIM47-204ENST00000587339 TTC3P53804 2025 aa20.76■□□□□ 0.91
TRIM47-204ENST00000587339 TBKBP1A7MCY6 615 aa20.75■□□□□ 0.91
TRIM47-204ENST00000587339 SYN3O14994 580 aa20.75■□□□□ 0.91
TRIM47-204ENST00000587339 CLTBP09497 229 aa20.75■□□□□ 0.91
TRIM47-204ENST00000587339 BCAR1P56945 870 aa20.75■□□□□ 0.91
TRIM47-204ENST00000587339 IKBKEQ14164 716 aa20.75■□□□□ 0.91
TRIM47-204ENST00000587339 DUPD1Q68J44 220 aa20.75■□□□□ 0.91
TRIM47-204ENST00000587339 DEFB106AQ8N104 65 aa20.75■□□□□ 0.91
TRIM47-204ENST00000587339 GRK7Q8WTQ7 553 aa20.75■□□□□ 0.91
TRIM47-204ENST00000587339 CENPIQ92674 756 aaPredicted RBP20.75■□□□□ 0.91
TRIM47-204ENST00000587339 COLEC11Q9BWP8 271 aa20.75■□□□□ 0.91
TRIM47-204ENST00000587339 CALN1Q9BXU9 219 aa20.75■□□□□ 0.91
TRIM47-204ENST00000587339 ULBP1Q9BZM6 244 aa20.75■□□□□ 0.91
TRIM47-204ENST00000587339 C11orf49Q9H6J7 331 aa20.75■□□□□ 0.91
TRIM47-204ENST00000587339 DMAP1Q9NPF5 467 aaPredicted RBP20.75■□□□□ 0.91
TRIM47-204ENST00000587339 CD48P09326 243 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 TFE3P19532 575 aaPredicted RBP20.74■□□□□ 0.91
TRIM47-204ENST00000587339 PPP1R7Q15435 360 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 C4orf50Q6ZRC1 276 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 GPRIN1Q7Z2K8 1008 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 SPATA2LQ8IUW3 424 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms