RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 CYP4A22Q5TCH4 519 aa15.7■□□□□ 0.1
NFIX-208ENST00000587260 Q7L0L9 218 aa15.7■□□□□ 0.1
NFIX-208ENST00000587260 TCEAL8Q8IYN2 117 aa15.7■□□□□ 0.1
NFIX-208ENST00000587260 C3orf20Q8ND61 904 aa15.7■□□□□ 0.1
NFIX-208ENST00000587260 TRIM58Q8NG06 486 aa15.7■□□□□ 0.1
NFIX-208ENST00000587260 IPO4Q8TEX9 1081 aaKnown RBP15.7■□□□□ 0.1
NFIX-208ENST00000587260 GIPC2Q8TF65 315 aa15.7■□□□□ 0.1
NFIX-208ENST00000587260 C16orf45Q96MC5 204 aaPredicted RBP15.7■□□□□ 0.1
NFIX-208ENST00000587260 SYNCQ9H7C4 482 aa15.7■□□□□ 0.1
NFIX-208ENST00000587260 MRPL47Q9HD33 250 aaKnown RBP15.7■□□□□ 0.1
NFIX-208ENST00000587260 PNPLA8Q9NP80 782 aa15.7■□□□□ 0.1
NFIX-208ENST00000587260 PARVAQ9NVD7 372 aa15.7■□□□□ 0.1
NFIX-208ENST00000587260 COG5Q9UP83 839 aa15.7■□□□□ 0.1
NFIX-208ENST00000587260 SCINQ9Y6U3 715 aa15.7■□□□□ 0.1
NFIX-208ENST00000587260 ZNF638Q14966 1978 aaKnown RBP15.7■□□□□ 0.1
NFIX-208ENST00000587260 SPDYE4A6NLX3 237 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 HHLA1C9JL84 531 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 E5RJQ4 531 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 ATMINO43313 823 aaPredicted RBP15.69■□□□□ 0.1
NFIX-208ENST00000587260 GABBR2O75899 941 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 MOCS3O95396 460 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 ERBB2P04626 1255 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 TUFMP49411 452 aaKnown RBP15.69■□□□□ 0.1
NFIX-208ENST00000587260 SLC5A3P53794 718 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 GNG11P61952 73 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 RPL10AP62906 217 aaKnown RBP15.69■□□□□ 0.1
NFIX-208ENST00000587260 ADIGQ0VDE8 80 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 PPP1R15BQ5SWA1 713 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 PHLDB2Q86SQ0 1253 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 XYLT1Q86Y38 959 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 ZDHHC17Q8IUH5 632 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 MICALL1Q8N3F8 863 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 TPCN2Q8NHX9 752 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 SLC22A17Q8WUG5 538 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 PPP2R3CQ969Q6 453 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 MCRS1Q96EZ8 462 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 C8orf48Q96LL4 319 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 NUP85Q9BW27 656 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 OSGEPQ9NPF4 335 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 CTTNBP2NLQ9P2B4 639 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 REV3LO60673 3130 aa15.69■□□□□ 0.1
NFIX-208ENST00000587260 SIGLEC16A6NMB1 481 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 BUB1O43683 1085 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 SCNN1AP37088 669 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 NOP2P46087 812 aaKnown RBP15.68■□□□□ 0.1
NFIX-208ENST00000587260 ALDH1A3P47895 512 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 TKTL1P51854 596 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 MTMR3Q13615 1198 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 RAB41Q5JT25 222 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 ZNF569Q5MCW4 686 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 CCDC149Q6ZUS6 474 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 SLFN11Q7Z7L1 901 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 SIX6OS1Q8N1H7 587 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 LRRC57Q8N9N7 239 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 VN1R2Q8NFZ6 395 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 SCAMP5Q8TAC9 235 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 UBE2Q2Q8WVN8 375 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 ALS2CR12Q96Q35 445 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 LRRC4Q9HBW1 653 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 HSFX1Q9UBD0 423 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 MTCH2Q9Y6C9 303 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 CAPN6Q9Y6Q1 641 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 RFPL2O75678 378 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 LRG1P02750 347 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 TNNT1P13805 278 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 HYAL1Q12794 435 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 PPM1LQ5SGD2 360 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 ZNF564Q8TBZ8 553 aaPredicted RBP15.68■□□□□ 0.1
NFIX-208ENST00000587260 CLEC4CQ8WTT0 213 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 WDR24Q96S15 920 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 GAS2L1Q99501 681 aaPredicted RBP15.68■□□□□ 0.1
NFIX-208ENST00000587260 LCMT1Q9UIC8 334 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 MAFFQ9ULX9 164 aa15.68■□□□□ 0.1
NFIX-208ENST00000587260 MAGED2Q9UNF1 606 aaPredicted RBP15.68■□□□□ 0.1
NFIX-208ENST00000587260 OBSL1O75147 1896 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 PRRC2BQ5JSZ5 2229 aaKnown RBP15.67■□□□□ 0.1
NFIX-208ENST00000587260 GRID2IPA4D2P6 1211 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 TMEM191CA6NGB0 347 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 SLC38A8A6NNN8 435 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 TNFRSF10BO14763 440 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 CCL16O15467 120 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 LINC01565O15544 149 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 PAPSS1O43252 624 aaPredicted RBP15.67■□□□□ 0.1
NFIX-208ENST00000587260 NAP1L1P55209 391 aaKnown RBP15.67■□□□□ 0.1
NFIX-208ENST00000587260 USP46P62068 366 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 PLD1Q13393 1074 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 VEPH1Q14D04 833 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 DNAJC24Q6P3W2 148 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 DENND5BQ6ZUT9 1274 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 FAM183BPQ6ZVS7 135 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 ARCQ7LC44 396 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 SYCE1Q8N0S2 351 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 NUP93Q8N1F7 819 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 SCML4Q8N228 414 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 SLC35F6Q8N357 371 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 FEZF2Q8TBJ5 459 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 SPATA17Q96L03 361 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 CDCA3Q99618 268 aaPredicted RBP15.67■□□□□ 0.1
NFIX-208ENST00000587260 ULBP1Q9BZM6 244 aa15.67■□□□□ 0.1
NFIX-208ENST00000587260 CHORDC1Q9UHD1 332 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms