RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 RPF1Q9H9Y2 349 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-211ENST00000586921 PLEKHA5Q9HAU0 1116 aa13.63□□□□□ -0.23
SMARCA4-211ENST00000586921 HCN2Q9UL51 889 aa13.63□□□□□ -0.23
SMARCA4-211ENST00000586921 RAD54BQ9Y620 910 aa13.63□□□□□ -0.23
SMARCA4-211ENST00000586921 H0Y8X5 98 aa13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 SUV39H1O43463 412 aa13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 XPOTO43592 962 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 LDOC1O95751 146 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 RPL10AP62906 217 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 NOLC1Q14978 699 aaKnown RBP eCLIP13.62□□□□□ -0.237e-6■□□□□ 9
SMARCA4-211ENST00000586921 SAFBQ15424 915 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 BTBD8Q5XKL5 378 aa13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 NAT16Q8N8M0 369 aa13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 TERB1Q8NA31 727 aa13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 KIFAP3Q92845 792 aa13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 POLD4Q9HCU8 107 aa13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 USP36Q9P275 1121 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 DEC1Q9P2X7 70 aa13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 CLCA2Q9UQC9 943 aa13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 ITPR2Q14571 2701 aa13.62□□□□□ -0.23
SMARCA4-211ENST00000586921 CCDC169A6NNP5 214 aa13.61□□□□□ -0.23
SMARCA4-211ENST00000586921 LAD1O00515 517 aa13.61□□□□□ -0.23
SMARCA4-211ENST00000586921 TULP3O75386 442 aa13.61□□□□□ -0.23
SMARCA4-211ENST00000586921 PAX3P23760 479 aa13.61□□□□□ -0.23
SMARCA4-211ENST00000586921 ZBTB6Q15916 424 aa13.61□□□□□ -0.23
SMARCA4-211ENST00000586921 LY6G5CQ5SRR4 150 aa13.61□□□□□ -0.23
SMARCA4-211ENST00000586921 ETFBKMTQ8IXQ9 262 aa13.61□□□□□ -0.23
SMARCA4-211ENST00000586921 BRF1Q92994 677 aa13.61□□□□□ -0.23
SMARCA4-211ENST00000586921 GABRG3Q99928 467 aa13.61□□□□□ -0.23
SMARCA4-211ENST00000586921 DPH1Q9BZG8 443 aa13.61□□□□□ -0.23
SMARCA4-211ENST00000586921 HSPBP1Q9NZL4 362 aa13.61□□□□□ -0.23
SMARCA4-211ENST00000586921 STARD13Q9Y3M8 1113 aa13.61□□□□□ -0.23
SMARCA4-211ENST00000586921 PCDHB6Q9Y5E3 794 aa13.61□□□□□ -0.23
SMARCA4-211ENST00000586921 SLCO1B1Q9Y6L6 691 aa13.61□□□□□ -0.23
SMARCA4-211ENST00000586921 NBASA2RRP1 2371 aa13.61□□□□□ -0.23
SMARCA4-211ENST00000586921 TTC26A0AVF1 554 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 K7ENP7 123 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 PAPSS1O43252 624 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 SPATA31C1P0DKV0 1188 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 PFKLP17858 780 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 OXTRP30559 389 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 GRIA4P48058 902 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 GAD2Q05329 585 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 PPP2R3AQ06190 1150 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 CALCRLQ16602 461 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 ADCK5Q3MIX3 580 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 INO80CQ6PI98 192 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 LAYNQ6UX15 382 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 PIK3AP1Q6ZUJ8 805 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 METTL3Q86U44 580 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 FAM177A1Q8N128 213 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 CACTIN-AS1Q8N1I8 211 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 EXD3Q8N9H8 876 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 ZBTB45Q96K62 511 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 TMEM134Q9H6X4 195 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 NCOA5Q9HCD5 579 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 ANO2Q9NQ90 1003 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 STARD5Q9NSY2 213 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 TMLHEQ9NVH6 421 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 SMPD4Q9NXE4 827 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 CFAP97Q9P2B7 532 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 MAN2B2Q9Y2E5 1009 aa13.6□□□□□ -0.23
SMARCA4-211ENST00000586921 KCNJ18B7U540 433 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 DFNA5O60443 496 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 IGHDP01880 384 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 CYP2F1P24903 491 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 TPMTP51580 245 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 TSPY1Q01534 308 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 TLE1Q04724 770 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 SSRP1Q08945 709 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 NFE2Q16621 373 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 Q6ZUG5 572 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 TAS1R3Q7RTX0 852 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 CATSPER3Q86XQ3 398 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 GATAD2AQ86YP4 633 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 DCBLD1Q8N8Z6 715 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 UBE2Q2Q8WVN8 375 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 PSMG3-AS1Q96PY0 264 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 PYM1Q9BRP8 204 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 TUFT1Q9NNX1 390 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 ABCB6Q9NP58 842 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 ITM2CQ9NQX7 267 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 TBC1D14Q9P2M4 693 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 CPQQ9Y646 472 aa13.59□□□□□ -0.23
SMARCA4-211ENST00000586921 BSNQ9UPA5 3926 aa13.58□□□□□ -0.23
SMARCA4-211ENST00000586921 CYB561D2O14569 222 aa13.58□□□□□ -0.24
SMARCA4-211ENST00000586921 HOXC11O43248 304 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-211ENST00000586921 TOM1L1O75674 476 aa13.58□□□□□ -0.24
SMARCA4-211ENST00000586921 DEXIO95424 95 aa13.58□□□□□ -0.24
SMARCA4-211ENST00000586921 MPOP05164 745 aa13.58□□□□□ -0.24
SMARCA4-211ENST00000586921 HMGB1P09429 215 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-211ENST00000586921 CLTAP09496 248 aa13.58□□□□□ -0.24
SMARCA4-211ENST00000586921 GRIK1P39086 918 aa13.58□□□□□ -0.24
SMARCA4-211ENST00000586921 TXKP42681 527 aa13.58□□□□□ -0.24
SMARCA4-211ENST00000586921 NPTX2P47972 431 aa13.58□□□□□ -0.24
SMARCA4-211ENST00000586921 PEX3P56589 373 aa13.58□□□□□ -0.24
SMARCA4-211ENST00000586921 ERVPABLB-1P60509 514 aa13.58□□□□□ -0.24
SMARCA4-211ENST00000586921 SLC7A9P82251 487 aa13.58□□□□□ -0.24
SMARCA4-211ENST00000586921 ILKQ13418 452 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms