RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 TSPAN16Q9UKR8 245 aa14.04□□□□□ -0.16
SMARCA4-210ENST00000586892 SCML2Q9UQR0 700 aa14.04□□□□□ -0.16
SMARCA4-210ENST00000586892 MRPS17Q9Y2R5 130 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-210ENST00000586892 SIT1Q9Y3P8 196 aa14.04□□□□□ -0.16
SMARCA4-210ENST00000586892 PIAS3Q9Y6X2 628 aa14.04□□□□□ -0.16
SMARCA4-210ENST00000586892 CACNA1HO95180 2353 aa14.04□□□□□ -0.16
SMARCA4-210ENST00000586892 O00370 1275 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 PI15O43692 258 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 KIF11P52732 1056 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 ZNF132P52740 706 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 MFAP3P55082 362 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 MTF1Q14872 753 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 STILQ15468 1287 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 GOLGA7BQ2TAP0 167 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 VWA3BQ502W6 1294 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 HSP90AA4PQ58FG1 418 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 TCP11X2Q5H9J9 407 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 SMYD5Q6GMV2 418 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 CCDC186Q7Z3E2 898 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 TTC30AQ86WT1 665 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 KIAA1958Q8N8K9 716 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 RBBP8NLQ8NC74 664 aaPredicted RBP14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 SH3RF2Q8TEC5 729 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 ZFYVE19Q96K21 471 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 KREMEN1Q96MU8 473 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 FAM83CQ9BQN1 747 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 FOXQ1Q9C009 403 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 RNF38Q9H0F5 515 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 C8orf33Q9H7E9 229 aaPredicted RBP14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 LTB4R2Q9NPC1 389 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 UBE2TQ9NPD8 197 aaPredicted RBP14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 GKN1Q9NS71 199 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 APEX2Q9UBZ4 518 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 RAPGEFL1Q9UHV5 662 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 CNTN6Q9UQ52 1028 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 COL4A3Q01955 1670 aa14.03□□□□□ -0.16
SMARCA4-210ENST00000586892 RNF225M0QZC1 329 aaPredicted RBP14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 XPO1O14980 1071 aaKnown RBP14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 CYP26A1O43174 497 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 COCHO43405 550 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 SETSIPP0DME0 302 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 SLC9A1P19634 815 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 CD72P21854 359 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 PON1P27169 355 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 PSEN1P49768 467 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 KPNA1P52294 538 aaPredicted RBP14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 BST2Q10589 180 aaKnown RBP14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 UBXN2BQ14CS0 331 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 PDGFRLQ15198 375 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 ITPRIPL2Q3MIP1 535 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 MIIPQ5JXC2 388 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 CDKAL1Q5VV42 579 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 LCLAT1Q6UWP7 414 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 C11orf57Q6ZUT1 292 aaPredicted RBP14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 PIGZQ86VD9 579 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 RALGPS2Q86X27 583 aaPredicted RBP14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 DDX42Q86XP3 938 aaKnown RBP eCLIP14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 RIN3Q8TB24 985 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 OSCP1Q8WVF1 389 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 GTSE1Q9NYZ3 720 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 CPQQ9Y646 472 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 USP3Q9Y6I4 520 aa14.02□□□□□ -0.17
SMARCA4-210ENST00000586892 SHISA7A6NL88 538 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 FAM170BA6NMN3 283 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 LEFTY2O00292 366 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 NCAM2O15394 837 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 GALR2O43603 387 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 TLR5O60602 858 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 MBL2P11226 248 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 KRT5P13647 590 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 PTMSP20962 102 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 MAGEA9P43362 315 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 ZXDBP98169 803 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 MYL5Q02045 173 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 TYRO3Q06418 890 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 TNK2Q07912 1038 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 PDE4CQ08493 712 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 RUNX3Q13761 415 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 CNGA2Q16280 664 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 RAB41Q5JT25 222 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 CAVIN1Q6NZI2 390 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 CCDC105Q8IYK2 499 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 TTC16Q8NEE8 873 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 TFAP2BQ92481 460 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 FAM3CQ92520 227 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 ATP2A3Q93084 1043 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 NACA2Q9H009 215 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 EBF3Q9H4W6 596 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 CCSER2Q9H7U1 834 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 CYLDQ9NQC7 956 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 DUS2Q9NX74 493 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 DLGAP2Q9P1A6 1054 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 MYO15AQ9UKN7 3530 aa14.01□□□□□ -0.17
SMARCA4-210ENST00000586892 SPECC1L-ADORA2AF8WAN1 911 aa14□□□□□ -0.17
SMARCA4-210ENST00000586892 PES1O00541 588 aaKnown RBP14□□□□□ -0.17
SMARCA4-210ENST00000586892 DCNP07585 359 aaKnown RBP14□□□□□ -0.17
SMARCA4-210ENST00000586892 TPM2P07951 284 aa14□□□□□ -0.17
SMARCA4-210ENST00000586892 TARSP26639 723 aaKnown RBP14□□□□□ -0.17
SMARCA4-210ENST00000586892 CTHP32929 405 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms