RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 VPS37CA5D8V6 355 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-225ENST00000586385 SLC9A3R1O14745 358 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-225ENST00000586385 KIAA0391O15091 583 aaKnown RBP12.65□□□□□ -0.38
BRCA1-225ENST00000586385 GREM1O60565 184 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 ABL1P00519 1130 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 APODP05090 189 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 MBL2P11226 248 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-225ENST00000586385 ANXA13P27216 316 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 GNL1P36915 607 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-225ENST00000586385 STAT6P42226 847 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 TNFRSF4P43489 277 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 PPP3CCP48454 512 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 CEBPZQ03701 1054 aaKnown RBP12.65□□□□□ -0.38
BRCA1-225ENST00000586385 CUL4AQ13619 759 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 COL9A2Q14055 689 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-225ENST00000586385 E2F4Q16254 413 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 HSF5Q4G112 596 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-225ENST00000586385 CCDC73Q6ZRK6 1079 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 EPM2AIP1Q7L775 607 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-225ENST00000586385 OR6B3Q8NGW1 331 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 SCAMP5Q8TAC9 235 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 PLEKHO2Q8TD55 490 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 USP28Q96RU2 1077 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 KCNK16Q96T55 309 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 TRIM9Q9C026 710 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 CAPN10Q9HC96 672 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 KLK13Q9UKR3 277 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-225ENST00000586385 MORC2Q9Y6X9 1032 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-225ENST00000586385 TNRC6BQ9UPQ9 1833 aaKnown RBP12.65□□□□□ -0.39
BRCA1-225ENST00000586385 PCNX2A6NKB5 2137 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 A0A1W2PQF6 199 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 E2F8A0AVK6 867 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 UPK3BL1B0FP48 263 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 UPK3BL2E5RIL1 263 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 HOXC11O43248 304 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-225ENST00000586385 TULP3O75386 442 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 ALDH1A2O94788 518 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 ADH1CP00326 375 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 CAPNS1P04632 268 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 GABRG2P18507 467 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 CYP24A1Q07973 514 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 IFRD2Q12894 506 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-225ENST00000586385 LMAN2Q12907 356 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 PSMD6Q15008 389 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 SPDYCQ5MJ68 293 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 EOGTQ5NDL2 527 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 TDRD10Q5VZ19 366 aaKnown RBP12.64□□□□□ -0.39
BRCA1-225ENST00000586385 LYSMD4Q5XG99 296 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 HS2ST1Q7LGA3 356 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 BBS7Q8IWZ6 715 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 DEFB119Q8N690 84 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 PDILTQ8N807 584 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 NAT16Q8N8M0 369 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 RDH13Q8NBN7 331 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 OR2I1PQ8NGU4 316 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 ELMO3Q96BJ8 720 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 P2RY11Q96G91 374 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 ACOX2Q99424 681 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 NUSAP1Q9BXS6 441 aaKnown RBP12.64□□□□□ -0.39
BRCA1-225ENST00000586385 CCSER2Q9H7U1 834 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 AGPAT3Q9NRZ7 376 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 IL37Q9NZH6 218 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 CHORDC1Q9UHD1 332 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-225ENST00000586385 CIZ1Q9ULV3 898 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-225ENST00000586385 NEUROG3Q9Y4Z2 214 aa12.64□□□□□ -0.39
BRCA1-225ENST00000586385 TMEM8BA6NDV4 472 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 TAF4O00268 1085 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 MAP3K13O43283 966 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 FAM163BP0C2L3 166 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 ZDHHC11BP0C7U3 371 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 DLATP10515 647 aaKnown RBP12.63□□□□□ -0.39
BRCA1-225ENST00000586385 YWHAQP27348 245 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 MYL6P60660 151 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 SLC39A14Q15043 492 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 SURF1Q15526 300 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 SNRNP35Q16560 246 aaKnown RBP12.63□□□□□ -0.39
BRCA1-225ENST00000586385 WDR72Q3MJ13 1102 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 SNX30Q5VWJ9 437 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 TMEM25Q86YD3 366 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 SLC41A1Q8IVJ1 513 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 CCDC65Q8IXS2 484 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 NUP93Q8N1F7 819 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 B3GALNT2Q8NCR0 500 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 ZMIZ2Q8NF64 920 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 ZNF507Q8TCN5 953 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 ZCCHC14Q8WYQ9 949 aaKnown RBP12.63□□□□□ -0.39
BRCA1-225ENST00000586385 FBXO32Q969P5 355 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 SPACA7Q96KW9 195 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 SLITRK1Q96PX8 696 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 CGRRF1Q99675 332 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 DUSP9Q99956 384 aaKnown RBP12.63□□□□□ -0.39
BRCA1-225ENST00000586385 ELOVL4Q9GZR5 314 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 SDCBP2Q9H190 292 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 SNX25Q9H3E2 840 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 SMYD3Q9H7B4 428 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 POLMQ9NP87 494 aaPredicted RBP12.63□□□□□ -0.39
BRCA1-225ENST00000586385 CD93Q9NPY3 652 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 KBTBD4Q9NVX7 518 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 CALCOCO1Q9P1Z2 691 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms