RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 MYL4P12829 197 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 GABRR2P28476 465 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 CDC25CP30307 473 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 CYLC1P35663 651 aaPredicted RBP14.33□□□□□ -0.12
VMP1-203ENST00000586245 MTHFRP42898 656 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 PPP3CCP48454 512 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 RPL34P49207 117 aaKnown RBP14.33□□□□□ -0.12
VMP1-203ENST00000586245 CENPCQ03188 943 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 TAF10Q12962 218 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 SLC18A3Q16572 532 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 TMC8Q8IU68 726 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 TMTC1Q8IUR5 882 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 CCDC170Q8IYT3 715 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 SMRP1Q8NCR6 262 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 SLC30A5Q8TAD4 765 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 OVCA2Q8WZ82 227 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 C18orf8Q96DM3 657 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 BAG1Q99933 345 aaPredicted RBP14.33□□□□□ -0.12
VMP1-203ENST00000586245 ZNF334Q9HCZ1 680 aaPredicted RBP14.33□□□□□ -0.12
VMP1-203ENST00000586245 TRPM5Q9NZQ8 1165 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 USP3Q9Y6I4 520 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 A0A087X0T9 212 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 FAM92AA1XBS5 289 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 RTN2O75298 545 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 CALB1P05937 261 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 FAM228BP0C875 321 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 GZMAP12544 262 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 FECHP22830 423 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 MMP8P22894 467 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 EPHA5P54756 1037 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 NTHL1P78549 312 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 CCDC122Q5T0U0 273 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 PM20D1Q6GTS8 502 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 OR6B2Q6IFH4 312 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 ALKBH5Q6P6C2 394 aaKnown RBP14.32□□□□□ -0.12
VMP1-203ENST00000586245 MMS22LQ6ZRQ5 1243 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 PHF13Q86YI8 300 aaPredicted RBP14.32□□□□□ -0.12
VMP1-203ENST00000586245 ZDHHC17Q8IUH5 632 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 SCML4Q8N228 414 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 ARHGAP18Q8N392 663 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 OLIG1Q8TAK6 271 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 GOLGA1Q92805 767 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 PDLIM2Q96JY6 352 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 NECTIN4Q96NY8 510 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 C11orf70Q9BRQ4 267 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 LRRC3Q9BY71 257 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 ATXN3LQ9H3M9 355 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 AVENQ9NQS1 362 aaPredicted RBP14.32□□□□□ -0.12
VMP1-203ENST00000586245 TLR8Q9NR97 1041 aaKnown RBP14.32□□□□□ -0.12
VMP1-203ENST00000586245 ADAM22Q9P0K1 906 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 GMIPQ9P107 970 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 STRIP2Q9ULQ0 834 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 CLUHO75153 1309 aa14.32□□□□□ -0.12
VMP1-203ENST00000586245 PATJQ8NI35 1801 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 A0A1W2PRU2 124 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 GABBR2O75899 941 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 ABL1P00519 1130 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 FTLP02792 175 aaPredicted RBP14.31□□□□□ -0.12
VMP1-203ENST00000586245 F11P03951 625 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 ERBB2P04626 1255 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 FSHRP23945 695 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 GABRB2P47870 512 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 DAOAP59103 153 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 MRPS5P82675 430 aaKnown RBP14.31□□□□□ -0.12
VMP1-203ENST00000586245 GFPT1Q06210 699 aaPredicted RBP14.31□□□□□ -0.12
VMP1-203ENST00000586245 C1QBPQ07021 282 aaKnown RBP14.31□□□□□ -0.12
VMP1-203ENST00000586245 CCDC173Q0VFZ6 552 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 SMAD4Q13485 552 aaKnown RBP14.31□□□□□ -0.12
VMP1-203ENST00000586245 ASTE1Q2TB18 679 aaPredicted RBP14.31□□□□□ -0.12
VMP1-203ENST00000586245 ARHGAP15Q53QZ3 475 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 TOGARAM2Q6ZUX3 1019 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 MON1AQ86VX9 555 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 SCUBE3Q8IX30 993 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 CCDC112Q8NEF3 446 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 FEZF2Q8TBJ5 459 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 IRGQQ8WZA9 623 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 MRPS31Q92665 395 aaKnown RBP14.31□□□□□ -0.12
VMP1-203ENST00000586245 TRIM11Q96F44 468 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 ISCUQ9H1K1 167 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 IL21Q9HBE4 155 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 WDR6Q9NNW5 1121 aaKnown RBP14.31□□□□□ -0.12
VMP1-203ENST00000586245 TAS2R14Q9NYV8 317 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 WDR35Q9P2L0 1181 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 TJP2Q9UDY2 1190 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 CHORDC1Q9UHD1 332 aaPredicted RBP14.31□□□□□ -0.12
VMP1-203ENST00000586245 NAGPAQ9UK23 515 aa14.31□□□□□ -0.12
VMP1-203ENST00000586245 MRPS23Q9Y3D9 190 aaKnown RBP14.31□□□□□ -0.12
VMP1-203ENST00000586245 USP15Q9Y4E8 981 aaPredicted RBP14.31□□□□□ -0.12
VMP1-203ENST00000586245 PAPSS1O43252 624 aaPredicted RBP14.3□□□□□ -0.12
VMP1-203ENST00000586245 IPO7O95373 1038 aaKnown RBP14.3□□□□□ -0.12
VMP1-203ENST00000586245 PSEN1P49768 467 aa14.3□□□□□ -0.12
VMP1-203ENST00000586245 YWHAGP61981 247 aaKnown RBP eCLIP14.3□□□□□ -0.12
VMP1-203ENST00000586245 ZNF268Q14587 947 aaPredicted RBP14.3□□□□□ -0.12
VMP1-203ENST00000586245 CBX2Q14781 532 aaPredicted RBP14.3□□□□□ -0.12
VMP1-203ENST00000586245 LEXMQ3ZCV2 418 aa14.3□□□□□ -0.12
VMP1-203ENST00000586245 EFHC1Q5JVL4 640 aa14.3□□□□□ -0.12
VMP1-203ENST00000586245 FAM183BPQ6ZVS7 135 aa14.3□□□□□ -0.12
VMP1-203ENST00000586245 GAREM2Q75VX8 874 aa14.3□□□□□ -0.12
VMP1-203ENST00000586245 MON1BQ7L1V2 547 aa14.3□□□□□ -0.12
VMP1-203ENST00000586245 XYLT1Q86Y38 959 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms