RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 CRTAC1Q9NQ79 661 aa6.49□□□□□ -1.37
LIG3-206ENST00000586058 CNGB3Q9NQW8 809 aa6.49□□□□□ -1.37
LIG3-206ENST00000586058 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.49□□□□□ -1.37
LIG3-206ENST00000586058 PCDHA3Q9Y5H8 950 aa6.49□□□□□ -1.37
LIG3-206ENST00000586058 COL4A4P53420 1690 aaPredicted RBP6.49□□□□□ -1.37
LIG3-206ENST00000586058 LRRD1A4D1F6 860 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 PIK3R2O00459 728 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 DPYSL4O14531 572 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 NDC80O14777 642 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 ZNF185O15231 689 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 ATP2C2O75185 946 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 TADA3O75528 432 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 TJP3O95049 919 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 OAZ2O95190 189 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 RTN3O95197 1032 aaPredicted RBP6.48□□□□□ -1.37
LIG3-206ENST00000586058 ZRANB2O95218 330 aaKnown RBP eCLIP6.48□□□□□ -1.37
LIG3-206ENST00000586058 GAS8O95995 478 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 ZBED1O96006 694 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 FGGP02679 453 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 GALTP07902 379 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 BDNFP23560 247 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 GBP1P32455 592 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 ELF1P32519 619 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 PTPN9P43378 593 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 GATMP50440 423 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 ZNF143P52747 638 aaPredicted RBP6.48□□□□□ -1.37
LIG3-206ENST00000586058 AIF1P55008 147 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 COPS2P61201 443 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 RPL7AP62424 266 aaKnown RBP6.48□□□□□ -1.37
LIG3-206ENST00000586058 YWHAZP63104 245 aaKnown RBP6.48□□□□□ -1.37
LIG3-206ENST00000586058 MRPS5P82675 430 aaKnown RBP6.48□□□□□ -1.37
LIG3-206ENST00000586058 LMNB2Q03252 620 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 C2orf54Q08AI8 447 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 IFRD2Q12894 506 aaPredicted RBP6.48□□□□□ -1.37
LIG3-206ENST00000586058 PTP4A2Q12974 167 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 VEPH1Q14D04 833 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 ELF2Q15723 593 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 PSMD5Q16401 504 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 MGAT5BQ3V5L5 792 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 PKDCCQ504Y2 493 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 TFDP3Q5H9I0 405 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 SCARA3Q6AZY7 606 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 PMF1Q6P1K2 205 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 SCYL2Q6P3W7 929 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 ELMSAN1Q6PJG2 1045 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 KCNT2Q6UVM3 1135 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 OLFML1Q6UWY5 402 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.48□□□□□ -1.37
LIG3-206ENST00000586058 ARCQ7LC44 396 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 OTOP2Q7RTS6 562 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 ZNF572Q7Z3I7 529 aaPredicted RBP6.48□□□□□ -1.37
LIG3-206ENST00000586058 MAATS1Q7Z4T9 603 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 TADA2BQ86TJ2 420 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 TMEM110Q86TL2 294 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 KATNAL2Q8IYT4 538 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 RCOR2Q8IZ40 523 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 FUKQ8N0W3 1084 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 TTC13Q8NBP0 860 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 SPATA4Q8NEY3 305 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 COG1Q8WTW3 980 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 RNF139Q8WU17 664 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 SLC35F5Q8WV83 523 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 IRGQQ8WZA9 623 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 CEP295NLQ96MC4 621 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 TBCBQ99426 244 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 SEPT5Q99719 369 aaPredicted RBP6.48□□□□□ -1.37
LIG3-206ENST00000586058 FERMT1Q9BQL6 677 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 HERC2P3Q9BVR0 1158 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 MAK16Q9BXY0 300 aaKnown RBP6.48□□□□□ -1.37
LIG3-206ENST00000586058 B3GNT5Q9BYG0 378 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 UBXN6Q9BZV1 441 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 ZCWPW1Q9H0M4 648 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 RAB17Q9H0T7 212 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 ACBD3Q9H3P7 528 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 SLITRK6Q9H5Y7 841 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 FAM204AQ9H8W3 233 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 ZWILCHQ9H900 591 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 POPDC2Q9HBU9 364 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.48□□□□□ -1.37
LIG3-206ENST00000586058 SPG21Q9NZD8 308 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 CHORDC1Q9UHD1 332 aaPredicted RBP6.48□□□□□ -1.37
LIG3-206ENST00000586058 FEZ2Q9UHY8 353 aaPredicted RBP6.48□□□□□ -1.37
LIG3-206ENST00000586058 INSL6Q9Y581 213 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 SLC4A7Q9Y6M7 1214 aa6.48□□□□□ -1.37
LIG3-206ENST00000586058 NUP210Q8TEM1 1887 aaPredicted RBP6.47□□□□□ -1.37
LIG3-206ENST00000586058 ATG2AQ2TAZ0 1938 aa6.47□□□□□ -1.37
LIG3-206ENST00000586058 TARSL2A2RTX5 802 aaKnown RBP6.47□□□□□ -1.37
LIG3-206ENST00000586058 MYBPHLA2RUH7 354 aa6.47□□□□□ -1.37
LIG3-206ENST00000586058 TRIM43BA6NCK2 446 aa6.47□□□□□ -1.37
LIG3-206ENST00000586058 NT5C1B-RDH14C9J2C7 533 aa6.47□□□□□ -1.37
LIG3-206ENST00000586058 CLDN5O00501 218 aa6.47□□□□□ -1.37
LIG3-206ENST00000586058 DDX3YO15523 660 aaKnown RBP6.47□□□□□ -1.37
LIG3-206ENST00000586058 CTIFO43310 598 aaKnown RBP6.47□□□□□ -1.37
LIG3-206ENST00000586058 HCRTO43612 131 aa6.47□□□□□ -1.37
LIG3-206ENST00000586058 TLL1O43897 1013 aa6.47□□□□□ -1.37
LIG3-206ENST00000586058 PHF2O75151 1096 aa6.47□□□□□ -1.37
LIG3-206ENST00000586058 GRAP2O75791 330 aa6.47□□□□□ -1.37
LIG3-206ENST00000586058 ZNF189O75820 626 aaPredicted RBP6.47□□□□□ -1.37
LIG3-206ENST00000586058 F9P00740 461 aa6.47□□□□□ -1.37
LIG3-206ENST00000586058 LTFP02788 710 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms