RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 KCNK16Q96T55 309 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 TTLL2Q9BWV7 592 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 RHOBTB2Q9BYZ6 727 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 SFXN1Q9H9B4 322 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 MAN1C1Q9NR34 630 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 TLR8Q9NR97 1041 aaKnown RBP13.59□□□□□ -0.23
TRIM47-202ENST00000585333 OLA1Q9NTK5 396 aaKnown RBP13.59□□□□□ -0.23
TRIM47-202ENST00000585333 IL37Q9NZH6 218 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 CTTNBP2NLQ9P2B4 639 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 MYO1AQ9UBC5 1043 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 STAP1Q9ULZ2 295 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 SCML2Q9UQR0 700 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 PAXBP1Q9Y5B6 917 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 USP3Q9Y6I4 520 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 LAMA2P24043 3122 aaKnown RBP13.59□□□□□ -0.23
TRIM47-202ENST00000585333 FAM92AA1XBS5 289 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 SIGLEC16A6NMB1 481 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 SLC38A8A6NNN8 435 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 SOBPA7XYQ1 873 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 HHLA1C9JL84 531 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 CAPN9O14815 690 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 MTA2O94776 668 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 CFHP08603 1231 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 RALAP11233 206 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 LCP1P13796 627 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 CDC25CP30307 473 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 SSTR3P32745 418 aaPredicted RBP13.58□□□□□ -0.24
TRIM47-202ENST00000585333 RGS7P49802 495 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 NAP1L1P55209 391 aaKnown RBP13.58□□□□□ -0.24
TRIM47-202ENST00000585333 YWHAZP63104 245 aaKnown RBP13.58□□□□□ -0.24
TRIM47-202ENST00000585333 TWF1Q12792 350 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 DDR2Q16832 855 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 ZSCAN30Q86W11 494 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 XYLT1Q86Y38 959 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 EFHBQ8N7U6 833 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 ACRBPQ8NEB7 543 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 ZMIZ2Q8NF64 920 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 CMASQ8NFW8 434 aaPredicted RBP13.58□□□□□ -0.24
TRIM47-202ENST00000585333 OLIG1Q8TAK6 271 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 SLC22A17Q8WUG5 538 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 FBXO32Q969P5 355 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 MYRFLQ96LU7 910 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 ZNF830Q96NB3 372 aaPredicted RBP13.58□□□□□ -0.24
TRIM47-202ENST00000585333 LPIN3Q9BQK8 851 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 DESI2Q9BSY9 194 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 THAP2Q9H0W7 228 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 POPDC2Q9HBU9 364 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 ABCC13Q9NSE7 274 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 TAS2R14Q9NYV8 317 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 CLIC5Q9NZA1 410 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 SLC27A5Q9Y2P5 690 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 HCFC2Q9Y5Z7 792 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 PTPRDP23468 1912 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 CLUHO75153 1309 aa13.58□□□□□ -0.24
TRIM47-202ENST00000585333 KIF2AO00139 706 aaPredicted RBP13.57□□□□□ -0.24
TRIM47-202ENST00000585333 MYO1FO00160 1098 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 ZNF197O14709 1029 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 TNFRSF10BO14763 440 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 ZNF263O14978 683 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 KIF5CO60282 957 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 BEST1O76090 585 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 SEC24AO95486 1093 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 RRM1P23921 792 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 NOP2P46087 812 aaKnown RBP13.57□□□□□ -0.24
TRIM47-202ENST00000585333 NRIP1P48552 1158 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 DAOAP59103 153 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 PTP4A2Q12974 167 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 PIGHQ14442 188 aaPredicted RBP13.57□□□□□ -0.24
TRIM47-202ENST00000585333 OLFML1Q6UWY5 402 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 TMEM184AQ6ZMB5 413 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 ZNF276Q8N554 614 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 TRIM58Q8NG06 486 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.57□□□□□ -0.24
TRIM47-202ENST00000585333 FEZF2Q8TBJ5 459 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 ZNF564Q8TBZ8 553 aaPredicted RBP13.57□□□□□ -0.24
TRIM47-202ENST00000585333 KIAA1524Q8TCG1 905 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 RNF139Q8WU17 664 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 FAM149B1Q96BN6 582 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 NUP85Q9BW27 656 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 ULBP1Q9BZM6 244 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 ASAH2Q9NR71 780 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 TRPM5Q9NZQ8 1165 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 IP6K2Q9UHH9 426 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 CYTH4Q9UIA0 394 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 MYH10P35580 1976 aa13.57□□□□□ -0.24
TRIM47-202ENST00000585333 PAPSS1O43252 624 aaPredicted RBP13.56□□□□□ -0.24
TRIM47-202ENST00000585333 DAB1O75553 588 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 VNN2O95498 520 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 F9P00740 461 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 LTFP02788 710 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 PTPN2P17706 415 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 ATF6P18850 670 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 DDX6P26196 483 aaKnown RBP eCLIP13.56□□□□□ -0.241e-8■■■■■ 66.6
TRIM47-202ENST00000585333 SDC4P31431 198 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 GBP1P32455 592 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 SLC1A1P43005 524 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 TUBP50607 506 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 KPNA1P52294 538 aaPredicted RBP13.56□□□□□ -0.24
TRIM47-202ENST00000585333 MAMLD1Q13495 774 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 CCDC142Q17RM4 750 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms