RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 RTL10Q7L3V2 364 aa16.96■□□□□ 0.31
SS18-226ENST00000585241 SCUBE3Q8IX30 993 aa16.96■□□□□ 0.31
SS18-226ENST00000585241 NUP93Q8N1F7 819 aa16.96■□□□□ 0.31
SS18-226ENST00000585241 LRRC57Q8N9N7 239 aa16.96■□□□□ 0.31
SS18-226ENST00000585241 ARNTL2Q8WYA1 636 aa16.96■□□□□ 0.31
SS18-226ENST00000585241 SEPT5Q99719 369 aaPredicted RBP16.96■□□□□ 0.31
SS18-226ENST00000585241 TTLL2Q9BWV7 592 aa16.96■□□□□ 0.31
SS18-226ENST00000585241 ULBP1Q9BZM6 244 aa16.96■□□□□ 0.31
SS18-226ENST00000585241 METTL5Q9NRN9 209 aaKnown RBP16.96■□□□□ 0.31
SS18-226ENST00000585241 PLXNA3P51805 1871 aa16.96■□□□□ 0.31
SS18-226ENST00000585241 CHD7Q9P2D1 2997 aa16.96■□□□□ 0.31
SS18-226ENST00000585241 GREB1Q4ZG55 1949 aa16.96■□□□□ 0.3
SS18-226ENST00000585241 TMEM265A0A087WTH1 108 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 GRID2IPA4D2P6 1211 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 GOLGA8SH3BPF8 625 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 PIK3R2O00459 728 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 BUB1O43683 1085 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 KIF5CO60282 957 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 RTN3O95197 1032 aaPredicted RBP16.95■□□□□ 0.3
SS18-226ENST00000585241 ZBED1O96006 694 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 GLUD1P00367 558 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 TUBB4AP04350 444 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 NOP2P46087 812 aaKnown RBP16.95■□□□□ 0.3
SS18-226ENST00000585241 EFHC1Q5JVL4 640 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 FAM102AQ5T9C2 384 aaPredicted RBP16.95■□□□□ 0.3
SS18-226ENST00000585241 C11orf63Q6NUN7 778 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 DENND5BQ6ZUT9 1274 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 BEND5Q7L4P6 421 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 SLFN11Q7Z7L1 901 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 PHLDB2Q86SQ0 1253 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 TRIM58Q8NG06 486 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 CLEC4CQ8WTT0 213 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 IRX2Q9BZI1 471 aaPredicted RBP16.95■□□□□ 0.3
SS18-226ENST00000585241 FBXO44Q9H4M3 255 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 CERS4Q9HA82 394 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 CYP4F11Q9HBI6 524 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 INSL5Q9Y5Q6 135 aa16.95■□□□□ 0.3
SS18-226ENST00000585241 MYO7AQ13402 2215 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 C2CD4BA6NLJ0 364 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 DPYSL4O14531 572 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 BUB1BO60566 1050 aaPredicted RBP16.94■□□□□ 0.3
SS18-226ENST00000585241 HSF2BPO75031 334 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 CLASP2O75122 1294 aaKnown RBP16.94■□□□□ 0.3
SS18-226ENST00000585241 SOAT2O75908 522 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 GJB6O95452 261 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 KLRC2P26717 231 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 ELF1P32519 619 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 CA8P35219 290 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 RPL7AP62424 266 aaKnown RBP16.94■□□□□ 0.3
SS18-226ENST00000585241 ETF1P62495 437 aaKnown RBP16.94■□□□□ 0.3
SS18-226ENST00000585241 PLD1Q13393 1074 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 SDHAF4Q5VUM1 108 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 CCDC149Q6ZUS6 474 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 JOSD2Q8TAC2 188 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 SCAMP5Q8TAC9 235 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 MICAL1Q8TDZ2 1067 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 GDPD5Q8WTR4 605 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 SLC22A17Q8WUG5 538 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 HDAC7Q8WUI4 952 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 UBE2Q2Q8WVN8 375 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 MCEEQ96PE7 176 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 ALS2CR12Q96Q35 445 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 SLC2A13Q96QE2 648 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 ANAPC7Q9UJX3 599 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 SCML2Q9UQR0 700 aa16.94■□□□□ 0.3
SS18-226ENST00000585241 MTCL1Q9Y4B5 1905 aaKnown RBP16.94■□□□□ 0.3
SS18-226ENST00000585241 SLC38A8A6NNN8 435 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 KIF2AO00139 706 aaPredicted RBP16.93■□□□□ 0.3
SS18-226ENST00000585241 PRRG1O14668 218 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 DAB1O75553 588 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 USP17L7P0C7H9 530 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 MAN1A1P33908 653 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 RFC1P35251 1148 aaPredicted RBP16.93■□□□□ 0.3
SS18-226ENST00000585241 OGDHQ02218 1023 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 ZNF252P-AS1Q0IIN9 211 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 TAF5Q15542 800 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 TRNP1Q6NT89 227 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 DCUN1D2Q6PH85 259 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 NIPA2Q8N8Q9 360 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 KREMEN2Q8NCW0 462 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 MRPL38Q96DV4 380 aaKnown RBP16.93■□□□□ 0.3
SS18-226ENST00000585241 MYRFLQ96LU7 910 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 TRIM7Q9C029 511 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 PLEKHA4Q9H4M7 779 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 EHD2Q9NZN4 543 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 IP6K2Q9UHH9 426 aa16.93■□□□□ 0.3
SS18-226ENST00000585241 YJEFN3A6XGL0 299 aa16.92■□□□□ 0.3
SS18-226ENST00000585241 E7ENQ6 273 aa16.92■□□□□ 0.3
SS18-226ENST00000585241 MYO1FO00160 1098 aa16.92■□□□□ 0.3
SS18-226ENST00000585241 PALMO75781 387 aa16.92■□□□□ 0.3
SS18-226ENST00000585241 PROSCO94903 275 aa16.92■□□□□ 0.3
SS18-226ENST00000585241 PAPLNO95428 1278 aa16.92■□□□□ 0.3
SS18-226ENST00000585241 CSH1P0DML2 217 aa16.92■□□□□ 0.3
SS18-226ENST00000585241 CSH2P0DML3 217 aa16.92■□□□□ 0.3
SS18-226ENST00000585241 HMGA1P17096 107 aaKnown RBP16.92■□□□□ 0.3
SS18-226ENST00000585241 FLT3P36888 993 aa16.92■□□□□ 0.3
SS18-226ENST00000585241 ALDH1A3P47895 512 aa16.92■□□□□ 0.3
SS18-226ENST00000585241 ZNF143P52747 638 aaPredicted RBP16.92■□□□□ 0.3
SS18-226ENST00000585241 NAP1L1P55209 391 aaKnown RBP16.92■□□□□ 0.3
SS18-226ENST00000585241 USP46P62068 366 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms