RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 TWNKQ96RR1 684 aa13.09□□□□□ -0.31
SS18-225ENST00000585121 P2RY13Q9BPV8 354 aa13.09□□□□□ -0.31
SS18-225ENST00000585121 RNF38Q9H0F5 515 aa13.09□□□□□ -0.31
SS18-225ENST00000585121 TLR8Q9NR97 1041 aaKnown RBP13.09□□□□□ -0.31
SS18-225ENST00000585121 CISHQ9NSE2 258 aa13.09□□□□□ -0.31
SS18-225ENST00000585121 SMPD4Q9NXE4 827 aa13.09□□□□□ -0.31
SS18-225ENST00000585121 VPS13AQ96RL7 3174 aa13.09□□□□□ -0.31
SS18-225ENST00000585121 BIN1O00499 593 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 ATG13O75143 517 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 OLFM2O95897 454 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 TUBP50607 506 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 GALK1P51570 392 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 MORC3Q14149 939 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 CBWD6Q4V339 395 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 ZNF394Q53GI3 561 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 TMEM196Q5HYL7 178 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 CBWD3Q5JTY5 395 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 CBWD5Q5RIA9 395 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 SNX30Q5VWJ9 437 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 CCDC26Q8TAB7 109 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 CD101Q93033 1021 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 JAKMIP2Q96AA8 810 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 TMEM176AQ96HP8 235 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 HINFPQ9BQA5 517 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 LINC00597Q9H2U6 94 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 PNPLA8Q9NP80 782 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 GMIPQ9P107 970 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 CFAP97Q9P2B7 532 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 TBC1D14Q9P2M4 693 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 COQ4Q9Y3A0 265 aa13.08□□□□□ -0.31
SS18-225ENST00000585121 FAM186AA6NE01 2351 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 ZNF638Q14966 1978 aaKnown RBP13.08□□□□□ -0.32
SS18-225ENST00000585121 FAM92AA1XBS5 289 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 OTOL1A6NHN0 477 aaPredicted RBP13.08□□□□□ -0.32
SS18-225ENST00000585121 BEST1O76090 585 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 FGFR1OPO95684 399 aaKnown RBP13.08□□□□□ -0.32
SS18-225ENST00000585121 GNA14O95837 355 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
SS18-225ENST00000585121 ACO1P21399 889 aaKnown RBP13.08□□□□□ -0.32
SS18-225ENST00000585121 TBXAS1P24557 533 aaPredicted RBP13.08□□□□□ -0.32
SS18-225ENST00000585121 SATB1Q01826 763 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 PAK1Q13153 545 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 FBXO43Q4G163 708 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 FOXR2Q6PJQ5 311 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 Q6ZS52 159 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 CLEC20AQ6ZU45 233 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 TRIML1Q8N9V2 468 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 ZBTB44Q8NCP5 570 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 ZMIZ2Q8NF64 920 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 WHAMMQ8TF30 809 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 SECISBP2LQ93073 1101 aaKnown RBP13.08□□□□□ -0.32
SS18-225ENST00000585121 TATDN2Q93075 761 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 SLC35C1Q96A29 364 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 DUSP16Q9BY84 665 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 RAB23Q9ULC3 237 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 CTNND2Q9UQB3 1225 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 SCML2Q9UQR0 700 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 SH3BP1Q9Y3L3 701 aa13.08□□□□□ -0.32
SS18-225ENST00000585121 COL4A2P08572 1712 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 PTPRDP23468 1912 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 DENND4CQ5VZ89 1909 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 E2F8A0AVK6 867 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 PPP1R3GB7ZBB8 358 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 COCHO43405 550 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 TLR5O60602 858 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 PAPSS2O95340 614 aaPredicted RBP13.07□□□□□ -0.32
SS18-225ENST00000585121 ZDHHC11BP0C7U3 371 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 GOLGA8FQ08AF8 430 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 GOLGA8DPQ0D2H9 430 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 CUL2Q13617 745 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 GAS6Q14393 721 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 PPP1R26Q5T8A7 1209 aaPredicted RBP13.07□□□□□ -0.32
SS18-225ENST00000585121 FSTL4Q6MZW2 842 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 TTI2Q6NXR4 508 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 TADA2BQ86TJ2 420 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 NELL1Q92832 810 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 CCSER2Q9H7U1 834 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 SLC8A2Q9UPR5 921 aa13.07□□□□□ -0.32
SS18-225ENST00000585121 EP300Q09472 2414 aaPredicted RBP13.06□□□□□ -0.32
SS18-225ENST00000585121 P4HA2O15460 535 aa13.06□□□□□ -0.32
SS18-225ENST00000585121 ADH1CP00326 375 aa13.06□□□□□ -0.32
SS18-225ENST00000585121 EGFP01133 1207 aa13.06□□□□□ -0.32
SS18-225ENST00000585121 FMO5P49326 533 aa13.06□□□□□ -0.32
SS18-225ENST00000585121 PSEN1P49768 467 aa13.06□□□□□ -0.32
SS18-225ENST00000585121 STX17P56962 302 aa13.06□□□□□ -0.32
SS18-225ENST00000585121 ZXDBP98169 803 aa13.06□□□□□ -0.32
SS18-225ENST00000585121 LRMPQ12912 555 aa13.06□□□□□ -0.32
SS18-225ENST00000585121 ADGRG2Q8IZP9 1017 aa13.06□□□□□ -0.32
SS18-225ENST00000585121 PIAS4Q8N2W9 510 aaPredicted RBP13.06□□□□□ -0.32
SS18-225ENST00000585121 SLC4A11Q8NBS3 891 aa13.06□□□□□ -0.32
SS18-225ENST00000585121 RUBCNQ92622 972 aa13.06□□□□□ -0.32
SS18-225ENST00000585121 OTUB2Q96DC9 234 aa13.06□□□□□ -0.32
SS18-225ENST00000585121 CHFRQ96EP1 664 aa13.06□□□□□ -0.32
SS18-225ENST00000585121 NT5C1BQ96P26 610 aa13.06□□□□□ -0.32
SS18-225ENST00000585121 DUSP9Q99956 384 aaKnown RBP13.06□□□□□ -0.32
SS18-225ENST00000585121 KIAA1468Q9P260 1216 aa13.06□□□□□ -0.32
SS18-225ENST00000585121 PMM2O15305 246 aa13.05□□□□□ -0.32
SS18-225ENST00000585121 LILRB5O75023 590 aa13.05□□□□□ -0.32
SS18-225ENST00000585121 RNF40O75150 1001 aa13.05□□□□□ -0.32
SS18-225ENST00000585121 CCDC192P0DO97 292 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms