RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 TRPM5Q9NZQ8 1165 aa19.33■□□□□ 0.68
TOP3A-220ENST00000585031 APOBEC2Q9Y235 224 aaKnown RBP19.33■□□□□ 0.68
TOP3A-220ENST00000585031 SNX9Q9Y5X1 595 aa19.33■□□□□ 0.68
TOP3A-220ENST00000585031 CABIN1Q9Y6J0 2220 aa19.32■□□□□ 0.68
TOP3A-220ENST00000585031 A0A1W2PQD8 194 aa19.32■□□□□ 0.68
TOP3A-220ENST00000585031 C1QL1O75973 258 aa19.32■□□□□ 0.68
TOP3A-220ENST00000585031 OAS1P00973 400 aaKnown RBP19.32■□□□□ 0.68
TOP3A-220ENST00000585031 MAOBP27338 520 aa19.32■□□□□ 0.68
TOP3A-220ENST00000585031 PNPLA4P41247 253 aa19.32■□□□□ 0.68
TOP3A-220ENST00000585031 CACNA2D1P54289 1103 aa19.32■□□□□ 0.68
TOP3A-220ENST00000585031 POU5F1Q01860 360 aaKnown RBP19.32■□□□□ 0.68
TOP3A-220ENST00000585031 SLC36A4Q6YBV0 504 aa19.32■□□□□ 0.68
TOP3A-220ENST00000585031 TMPRSS7Q7RTY8 843 aa19.32■□□□□ 0.68
TOP3A-220ENST00000585031 ADGRF2Q8IZF7 708 aa19.32■□□□□ 0.68
TOP3A-220ENST00000585031 KIAA1958Q8N8K9 716 aa19.32■□□□□ 0.68
TOP3A-220ENST00000585031 MYLPFQ96A32 169 aa19.32■□□□□ 0.68
TOP3A-220ENST00000585031 CDK5RAP3Q96JB5 506 aa19.32■□□□□ 0.68
TOP3A-220ENST00000585031 CYP8B1Q9UNU6 501 aa19.32■□□□□ 0.68
TOP3A-220ENST00000585031 LIMCH1Q9UPQ0 1083 aa19.32■□□□□ 0.68
TOP3A-220ENST00000585031 NME7Q9Y5B8 376 aa19.32■□□□□ 0.68
TOP3A-220ENST00000585031 CYSRT1A8MQ03 144 aa19.31■□□□□ 0.68
TOP3A-220ENST00000585031 IL18RAPO95256 599 aa19.31■□□□□ 0.68
TOP3A-220ENST00000585031 NDUFV2P19404 249 aa19.31■□□□□ 0.68
TOP3A-220ENST00000585031 SCP2P22307 547 aa19.31■□□□□ 0.68
TOP3A-220ENST00000585031 SLFN12LQ6IEE8 588 aa19.31■□□□□ 0.68
TOP3A-220ENST00000585031 DENND5BQ6ZUT9 1274 aa19.31■□□□□ 0.68
TOP3A-220ENST00000585031 NT5DC4Q86YG4 428 aa19.31■□□□□ 0.68
TOP3A-220ENST00000585031 SCUBE3Q8IX30 993 aa19.31■□□□□ 0.68
TOP3A-220ENST00000585031 CSGALNACT2Q8N6G5 542 aa19.31■□□□□ 0.68
TOP3A-220ENST00000585031 ZNF513Q8N8E2 541 aaPredicted RBP19.31■□□□□ 0.68
TOP3A-220ENST00000585031 POMGNT1Q8WZA1 660 aa19.31■□□□□ 0.68
TOP3A-220ENST00000585031 SAAL1Q96ER3 474 aa19.31■□□□□ 0.68
TOP3A-220ENST00000585031 ZNF419Q96HQ0 510 aaPredicted RBP19.31■□□□□ 0.68
TOP3A-220ENST00000585031 ZFRQ96KR1 1074 aaKnown RBP19.31■□□□□ 0.68
TOP3A-220ENST00000585031 UBL7Q96S82 380 aaPredicted RBP19.31■□□□□ 0.68
TOP3A-220ENST00000585031 SYT15Q9BQS2 421 aa19.31■□□□□ 0.68
TOP3A-220ENST00000585031 FAM213AQ9BRX8 229 aa19.31■□□□□ 0.68
TOP3A-220ENST00000585031 TOR4AQ9NXH8 423 aa19.31■□□□□ 0.68
TOP3A-220ENST00000585031 MAGEC2Q9UBF1 373 aaPredicted RBP19.31■□□□□ 0.68
TOP3A-220ENST00000585031 TBC1D3BA6NDS4 549 aa19.3■□□□□ 0.68
TOP3A-220ENST00000585031 TULP1O00294 542 aaPredicted RBP19.3■□□□□ 0.68
TOP3A-220ENST00000585031 TULP3O75386 442 aa19.3■□□□□ 0.68
TOP3A-220ENST00000585031 PFKLP17858 780 aa19.3■□□□□ 0.68
TOP3A-220ENST00000585031 GRIK1P39086 918 aa19.3■□□□□ 0.68
TOP3A-220ENST00000585031 LHX1P48742 406 aa19.3■□□□□ 0.68
TOP3A-220ENST00000585031 PLEKHG6Q3KR16 790 aa19.3■□□□□ 0.68
TOP3A-220ENST00000585031 EGFLAMQ63HQ2 1017 aa19.3■□□□□ 0.68
TOP3A-220ENST00000585031 TOP6BLQ8N6T0 577 aa19.3■□□□□ 0.68
TOP3A-220ENST00000585031 LRRC52Q8N7C0 313 aa19.3■□□□□ 0.68
TOP3A-220ENST00000585031 STRA6Q9BX79 667 aa19.3■□□□□ 0.68
TOP3A-220ENST00000585031 ST6GALNAC4Q9H4F1 302 aa19.3■□□□□ 0.68
TOP3A-220ENST00000585031 IL21RQ9HBE5 538 aa19.3■□□□□ 0.68
TOP3A-220ENST00000585031 PCOLCE2Q9UKZ9 415 aa19.3■□□□□ 0.68
TOP3A-220ENST00000585031 SLC9A3R1O14745 358 aaPredicted RBP19.29■□□□□ 0.68
TOP3A-220ENST00000585031 PPP1R37O75864 691 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 DKK1O94907 266 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 ADH1CP00326 375 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 ABL1P00519 1130 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 PDGFRBP09619 1106 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 HOXB2P14652 356 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 PCSK1P29120 753 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 PDE6CP51160 858 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 GRIN1Q05586 938 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 TAF10Q12962 218 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 GRIK2Q13002 908 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 VSTM1Q6UX27 236 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 ZNF720Q7Z2F6 126 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 TMEM25Q86YD3 366 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 BRSK2Q8IWQ3 736 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 FAM184AQ8NB25 1140 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 TRIM9Q9C026 710 aa19.29■□□□□ 0.68
TOP3A-220ENST00000585031 PTPRJQ12913 1337 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 GOLGA8IPA6NC78 632 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 GOLGA8JA6NMD2 632 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 F8VP50 259 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 NTSR1P30989 418 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 HMGN5P82970 282 aaKnown RBP19.28■□□□□ 0.68
TOP3A-220ENST00000585031 BNC1Q01954 994 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 CYP4F3Q08477 520 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 C10orf76Q5T2E6 689 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 C4orf50Q6ZRC1 276 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 RGL4Q8IZJ4 473 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 KCNV2Q8TDN2 545 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 SLC39A7Q92504 469 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 RAD54LQ92698 747 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 PCED1BQ96HM7 432 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 MTMR12Q9C0I1 747 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 PDE11AQ9HCR9 933 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 TMEM131Q92545 1883 aa19.28■□□□□ 0.68
TOP3A-220ENST00000585031 ZNF462Q96JM2 2506 aa19.27■□□□□ 0.68
TOP3A-220ENST00000585031 TRABD2BA6NFA1 517 aa19.27■□□□□ 0.68
TOP3A-220ENST00000585031 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.27■□□□□ 0.68
TOP3A-220ENST00000585031 KRT19P08727 400 aa19.27■□□□□ 0.68
TOP3A-220ENST00000585031 ATXN1LP0C7T5 689 aaKnown RBP19.27■□□□□ 0.68
TOP3A-220ENST00000585031 MBL2P11226 248 aaPredicted RBP19.27■□□□□ 0.68
TOP3A-220ENST00000585031 NOP14P78316 857 aaKnown RBP19.27■□□□□ 0.68
TOP3A-220ENST00000585031 CYP27A1Q02318 531 aa19.27■□□□□ 0.68
TOP3A-220ENST00000585031 CAMK2BQ13554 666 aa19.27■□□□□ 0.68
TOP3A-220ENST00000585031 SFR1Q86XK3 245 aa19.27■□□□□ 0.68
TOP3A-220ENST00000585031 TERB1Q8NA31 727 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms