RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 DDX6P26196 483 aaKnown RBP eCLIP14.6□□□□□ -0.07
TRAF4-215ENST00000584944 AVPR1AP37288 418 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 ACADSBP45954 432 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 RGS7P49802 495 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 VCPP55072 806 aaKnown RBP14.6□□□□□ -0.07
TRAF4-215ENST00000584944 ZBED6P86452 979 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 KLHL30Q0D2K2 578 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 TAF10Q12962 218 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 MEA1Q16626 185 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 TDRD12Q587J7 1177 aaKnown RBP14.6□□□□□ -0.07
TRAF4-215ENST00000584944 GPR158Q5T848 1215 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 DENND1BQ6P3S1 775 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 TRIM72Q6ZMU5 477 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 TADA2BQ86TJ2 420 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 TTC30AQ86WT1 665 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 VSTM4Q8IW00 320 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 TTC16Q8NEE8 873 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 SCAMP5Q8TAC9 235 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 AVENQ9NQS1 362 aaPredicted RBP14.6□□□□□ -0.07
TRAF4-215ENST00000584944 GDE1Q9NZC3 331 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 CDH7Q9ULB5 785 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 USTQ9Y2C2 406 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 BZW2Q9Y6E2 419 aaKnown RBP14.6□□□□□ -0.07
TRAF4-215ENST00000584944 MTCL1Q9Y4B5 1905 aaKnown RBP14.6□□□□□ -0.07
TRAF4-215ENST00000584944 USP34Q70CQ2 3546 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 TRAV19A0A0A6YYK7 116 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 SART1O43290 800 aaKnown RBP14.59□□□□□ -0.07
TRAF4-215ENST00000584944 FBXO21O94952 628 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 LSM8O95777 96 aaKnown RBP14.59□□□□□ -0.07
TRAF4-215ENST00000584944 ZBED1O96006 694 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 CKMP06732 381 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 RALAP11233 206 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 GJA1P17302 382 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 TNFAIP3P21580 790 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 AVPR2P30518 371 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 CASP14P31944 242 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 PLA2G4AP47712 749 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 ZNF75DP51815 510 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 CDR2Q01850 454 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 ADIGQ0VDE8 80 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 TEAD2Q15562 447 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 DPY19L2P1Q6NXN4 242 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 MTSS1LQ765P7 747 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 RSRC2Q7L4I2 434 aaKnown RBP14.59□□□□□ -0.07
TRAF4-215ENST00000584944 ITFG1Q8TB96 612 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 OVCA2Q8WZ82 227 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 FGF13Q92913 245 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 MCRS1Q96EZ8 462 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 HSFY1Q96LI6 401 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 MYRFLQ96LU7 910 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 TRIM62Q9BVG3 475 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 LHX5Q9H2C1 402 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 ZNF334Q9HCZ1 680 aaPredicted RBP14.59□□□□□ -0.07
TRAF4-215ENST00000584944 NAGPAQ9UK23 515 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 CAPN11Q9UMQ6 739 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 PCDHGC3Q9UN70 934 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 SORCS3Q9UPU3 1222 aa14.59□□□□□ -0.07
TRAF4-215ENST00000584944 PAPLNO95428 1278 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 PDGFBP01127 241 aaPredicted RBP14.58□□□□□ -0.08
TRAF4-215ENST00000584944 USP17L7P0C7H9 530 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 HMGA1P17096 107 aaKnown RBP14.58□□□□□ -0.08
TRAF4-215ENST00000584944 CEBPBP17676 345 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 PBX1P40424 430 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 NSFP46459 744 aaKnown RBP14.58□□□□□ -0.08
TRAF4-215ENST00000584944 PSEN1P49768 467 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 EPHA5P54756 1037 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 USP46P62068 366 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 CYP4F8P98187 520 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 SLC5A9Q2M3M2 681 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 NOP9Q86U38 636 aaKnown RBP14.58□□□□□ -0.08
TRAF4-215ENST00000584944 CNGA4Q8IV77 575 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 UBALD2Q8IYN6 164 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 MAB21L3Q8N8X9 362 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 C1orf131Q8NDD1 294 aaKnown RBP14.58□□□□□ -0.08
TRAF4-215ENST00000584944 ZMIZ2Q8NF64 920 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 SHKBP1Q8TBC3 707 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 EPS8L1Q8TE68 723 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 KCTD13Q8WZ19 329 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 TCEAL4Q96EI5 215 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 MRFAP1L1Q96HT8 127 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 PPP1R13BQ96KQ4 1090 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 CDK5RAP1Q96SZ6 601 aaKnown RBP14.58□□□□□ -0.08
TRAF4-215ENST00000584944 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.58□□□□□ -0.08
TRAF4-215ENST00000584944 TTLL2Q9BWV7 592 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 TMEM30AQ9NV96 361 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 GMIPQ9P107 970 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 CHORDC1Q9UHD1 332 aaPredicted RBP14.58□□□□□ -0.08
TRAF4-215ENST00000584944 SCML2Q9UQR0 700 aa14.58□□□□□ -0.08
TRAF4-215ENST00000584944 PIK3R2O00459 728 aa14.57□□□□□ -0.08
TRAF4-215ENST00000584944 MMEP08473 750 aa14.57□□□□□ -0.08
TRAF4-215ENST00000584944 LAMP2P13473 410 aa14.57□□□□□ -0.08
TRAF4-215ENST00000584944 KIF11P52732 1056 aa14.57□□□□□ -0.08
TRAF4-215ENST00000584944 GOLGA8FQ08AF8 430 aa14.57□□□□□ -0.08
TRAF4-215ENST00000584944 GOLGA8DPQ0D2H9 430 aa14.57□□□□□ -0.08
TRAF4-215ENST00000584944 PDCLQ13371 301 aa14.57□□□□□ -0.08
TRAF4-215ENST00000584944 HECTD3Q5T447 861 aa14.57□□□□□ -0.08
TRAF4-215ENST00000584944 BTBD8Q5XKL5 378 aa14.57□□□□□ -0.08
TRAF4-215ENST00000584944 PPP1R2P3Q6NXS1 205 aa14.57□□□□□ -0.08
TRAF4-215ENST00000584944 PMF1Q6P1K2 205 aa14.57□□□□□ -0.08
TRAF4-215ENST00000584944 GAREM2Q75VX8 874 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms