RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 DLDP09622 509 aaKnown RBP3.62□□□□□ -1.83
VAPA-208ENST00000584796 LRPAP1P30533 357 aa3.62□□□□□ -1.83
VAPA-208ENST00000584796 RENBPP51606 427 aa3.62□□□□□ -1.83
VAPA-208ENST00000584796 MYO1EQ12965 1108 aa3.62□□□□□ -1.83
VAPA-208ENST00000584796 CYP1B1Q16678 543 aa3.62□□□□□ -1.83
VAPA-208ENST00000584796 ZNF813Q6ZN06 617 aa3.62□□□□□ -1.83
VAPA-208ENST00000584796 CATIPQ7Z7H3 387 aa3.62□□□□□ -1.83
VAPA-208ENST00000584796 FAM118BQ9BPY3 351 aa3.62□□□□□ -1.83
VAPA-208ENST00000584796 ADGRE3Q9BY15 652 aa3.62□□□□□ -1.83
VAPA-208ENST00000584796 GTPBP4Q9BZE4 634 aaKnown RBP3.62□□□□□ -1.83
VAPA-208ENST00000584796 CXorf36Q9H7Y0 433 aa3.62□□□□□ -1.83
VAPA-208ENST00000584796 TRNAU1APQ9NX07 287 aaKnown RBP3.62□□□□□ -1.83
VAPA-208ENST00000584796 XPR1Q9UBH6 696 aa3.62□□□□□ -1.83
VAPA-208ENST00000584796 MED16Q9Y2X0 877 aa3.62□□□□□ -1.83
VAPA-208ENST00000584796 UBE2Q2LH0YL09 131 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 hCG_1984214I3L0E3 225 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 EXOC3O60645 756 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 SNUPNO95149 360 aaKnown RBP3.61□□□□□ -1.83
VAPA-208ENST00000584796 FGBP02675 491 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 PRKCBP05771 671 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 CYP2C9P11712 490 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 FPR3P25089 353 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 IL1R2P27930 398 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 WNT3P56703 355 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 EVA1CP58658 441 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 LINC00205P59089 165 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 HTRA4P83105 476 aaPredicted RBP3.61□□□□□ -1.83
VAPA-208ENST00000584796 RNASE12Q5GAN4 147 aaKnown RBP3.61□□□□□ -1.83
VAPA-208ENST00000584796 L1TD1Q5T7N2 865 aaKnown RBP3.61□□□□□ -1.83
VAPA-208ENST00000584796 MEX3CQ5U5Q3 659 aaKnown RBP3.61□□□□□ -1.83
VAPA-208ENST00000584796 MRPL10Q7Z7H8 261 aaKnown RBP3.61□□□□□ -1.83
VAPA-208ENST00000584796 SLC15A3Q8IY34 581 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 CELF5Q8N6W0 485 aaKnown RBP3.61□□□□□ -1.83
VAPA-208ENST00000584796 NANOGP1Q8N7R0 232 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 NRACQ8N912 160 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 ZNF398Q8TD17 642 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 OSCP1Q8WVF1 389 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 MVB12AQ96EY5 273 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 CDK5RAP3Q96JB5 506 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 MESP1Q9BRJ9 268 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 CIPCQ9C0C6 399 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 ZNF580Q9UK33 172 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 CCNL1Q9UK58 526 aaPredicted RBP3.61□□□□□ -1.83
VAPA-208ENST00000584796 MRPS17Q9Y2R5 130 aaKnown RBP3.61□□□□□ -1.83
VAPA-208ENST00000584796 MROH1Q8NDA8 1641 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 SHPRHQ149N8 1683 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.61□□□□□ -1.83
VAPA-208ENST00000584796 NPHP4O75161 1426 aaPredicted RBP3.61□□□□□ -1.83
VAPA-208ENST00000584796 CNTLNQ9NXG0 1405 aa3.61□□□□□ -1.83
VAPA-208ENST00000584796 BRWD3Q6RI45 1802 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 MED14O60244 1454 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 LY6G6EA0A0G2JKS1 128 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 PLEKHD1A6NEE1 506 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 CBSLP0DN79 551 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 SNHG28P0DPA3 235 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 AKAP5P24588 427 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 CBSP35520 551 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 KCNJ5P48544 419 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 UCP3P55916 312 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 KRTAP10-6P60371 365 aaPredicted RBP3.6□□□□□ -1.83
VAPA-208ENST00000584796 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
VAPA-208ENST00000584796 LRRC41Q15345 812 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 TWIST1Q15672 202 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 ZIK1Q3SY52 487 aaPredicted RBP3.6□□□□□ -1.83
VAPA-208ENST00000584796 KHDC1LQ5JSQ8 128 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 DEPDC1Q5TB30 811 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 RUSC1-AS1Q66K80 236 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 IRF2BP2Q7Z5L9 587 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 BCDIN3DQ7Z5W3 292 aaKnown RBP3.6□□□□□ -1.83
VAPA-208ENST00000584796 GAS2L3Q86XJ1 694 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 ZNF280BQ86YH2 543 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 ZDHHC17Q8IUH5 632 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 ABRAQ8N0Z2 381 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 C16orf52Q8NHV5 167 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.6□□□□□ -1.83
VAPA-208ENST00000584796 MTFMTQ96DP5 389 aaKnown RBP3.6□□□□□ -1.83
VAPA-208ENST00000584796 RSPRY1Q96DX4 576 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 HSPBAP1Q96EW2 488 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 VCPIP1Q96JH7 1222 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 MRGPRX1Q96LB2 322 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 SMAD5Q99717 465 aaKnown RBP3.6□□□□□ -1.83
VAPA-208ENST00000584796 EBF3Q9H4W6 596 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 SARS2Q9NP81 518 aaKnown RBP3.6□□□□□ -1.83
VAPA-208ENST00000584796 ASIC5Q9NY37 505 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 MTMR4Q9NYA4 1195 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 PCDHA6Q9UN73 950 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 TMX2Q9Y320 296 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 SBNO2Q9Y2G9 1366 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 TROQ12816 1431 aaPredicted RBP3.6□□□□□ -1.83
VAPA-208ENST00000584796 ARHGAP35Q9NRY4 1499 aa3.6□□□□□ -1.83
VAPA-208ENST00000584796 DIP2AQ14689 1571 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 PIK3C2BO00750 1634 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 KDM5AP29375 1690 aaKnown RBP3.59□□□□□ -1.83
VAPA-208ENST00000584796 MYMKA6NI61 221 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 BTBD19C9JJ37 291 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 TOM1O60784 492 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 IL33O95760 270 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 ALDH2P05091 517 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 THP07101 528 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 MYCLP12524 364 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms