RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 PCDHA13Q9Y5I0 950 aa19.26■□□□□ 0.67
RFFL-211ENST00000584541 PRRC2BQ5JSZ5 2229 aaKnown RBP19.25■□□□□ 0.67
RFFL-211ENST00000584541 CCDC195A0A1B0GUA6 201 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 ZNF263O14978 683 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 RFPL2O75678 378 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 ZBED1O96006 694 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 POU2F2P09086 479 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 GALCP54803 685 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 ADAM15Q13444 863 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 MTMR3Q13615 1198 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 KIAA1328Q86T90 577 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 SCUBE3Q8IX30 993 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 SCML4Q8N228 414 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 STKLD1Q8NE28 680 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 VN1R2Q8NFZ6 395 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 IRGQQ8WZA9 623 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 GOLGA1Q92805 767 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 FBXO32Q969P5 355 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 TRMT2BQ96GJ1 504 aaKnown RBP19.25■□□□□ 0.67
RFFL-211ENST00000584541 TTLL2Q9BWV7 592 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 PRKD2Q9BZL6 878 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 PIDD1Q9HB75 910 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 IL37Q9NZH6 218 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 TJP2Q9UDY2 1190 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 SCML2Q9UQR0 700 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 USP3Q9Y6I4 520 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 TRANK1O15050 2925 aa19.25■□□□□ 0.67
RFFL-211ENST00000584541 LINC01565O15544 149 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 GLP2RO95838 553 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 USP17L7P0C7H9 530 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 FOSL2P15408 326 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 HOXB8P17481 243 aaPredicted RBP19.24■□□□□ 0.67
RFFL-211ENST00000584541 PTPN2P17706 415 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 GPC5P78333 572 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 MRPS5P82675 430 aaKnown RBP19.24■□□□□ 0.67
RFFL-211ENST00000584541 RBM10P98175 930 aaKnown RBP19.24■□□□□ 0.67
RFFL-211ENST00000584541 PTP4A2Q12974 167 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 C2CD6Q53TS8 623 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 PM20D1Q6GTS8 502 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 ANKRD54Q6NXT1 300 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 EP400NLQ6ZTU2 488 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 FAM183BPQ6ZVS7 135 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 XYLT1Q86Y38 959 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 DNAAF5Q86Y56 855 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 ARHGAP18Q8N392 663 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 ACRBPQ8NEB7 543 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 PDZD8Q8NEN9 1154 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 CMASQ8NFW8 434 aaPredicted RBP19.24■□□□□ 0.67
RFFL-211ENST00000584541 DESI2Q9BSY9 194 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 ASAH2Q9NR71 780 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 CLDND1Q9NY35 253 aa19.24■□□□□ 0.67
RFFL-211ENST00000584541 CNOT8Q9UFF9 292 aaKnown RBP19.24■□□□□ 0.67
RFFL-211ENST00000584541 OBSL1O75147 1896 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 GOLGA8SH3BPF8 625 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 PAPSS1O43252 624 aaPredicted RBP19.23■□□□□ 0.67
RFFL-211ENST00000584541 GABBR2O75899 941 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 FGF19O95750 216 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 CCDC175P0C221 793 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 TMEM253P0C7T8 217 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 HMGA1P17096 107 aaKnown RBP19.23■□□□□ 0.67
RFFL-211ENST00000584541 SCNN1AP37088 669 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 PPP3CCP48454 512 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 GSCP56915 257 aaPredicted RBP19.23■□□□□ 0.67
RFFL-211ENST00000584541 DAOAP59103 153 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 USP46P62068 366 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 SLC6A3Q01959 620 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 TAF10Q12962 218 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 PABPC1LQ4VXU2 614 aaKnown RBP19.23■□□□□ 0.67
RFFL-211ENST00000584541 EFHC1Q5JVL4 640 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 FAM102AQ5T9C2 384 aaPredicted RBP19.23■□□□□ 0.67
RFFL-211ENST00000584541 DNAJC24Q6P3W2 148 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 LEMD2Q8NC56 503 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 C3orf20Q8ND61 904 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 OVCA2Q8WZ82 227 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 SMG7Q92540 1137 aaKnown RBP19.23■□□□□ 0.67
RFFL-211ENST00000584541 MYRFLQ96LU7 910 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 GCNAQ96QF7 691 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 CORO1BQ9BR76 489 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 TRIM62Q9BVG3 475 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 SELENOOQ9BVL4 669 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 THAP2Q9H0W7 228 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 MRPL47Q9HD33 250 aaKnown RBP19.23■□□□□ 0.67
RFFL-211ENST00000584541 TLR8Q9NR97 1041 aaKnown RBP19.23■□□□□ 0.67
RFFL-211ENST00000584541 PARVAQ9NVD7 372 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 MYO1AQ9UBC5 1043 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 SCINQ9Y6U3 715 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 DENND4CQ5VZ89 1909 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 C2orf16Q68DN1 1984 aa19.23■□□□□ 0.67
RFFL-211ENST00000584541 FAM92AA1XBS5 289 aa19.22■□□□□ 0.67
RFFL-211ENST00000584541 RRM1P23921 792 aa19.22■□□□□ 0.67
RFFL-211ENST00000584541 PSEN1P49768 467 aa19.22■□□□□ 0.67
RFFL-211ENST00000584541 VAV2P52735 878 aa19.22■□□□□ 0.67
RFFL-211ENST00000584541 RARS2Q5T160 578 aaKnown RBP19.22■□□□□ 0.67
RFFL-211ENST00000584541 OLFML1Q6UWY5 402 aa19.22■□□□□ 0.67
RFFL-211ENST00000584541 MON1AQ86VX9 555 aa19.22■□□□□ 0.67
RFFL-211ENST00000584541 C12orf76Q8N812 135 aaPredicted RBP19.22■□□□□ 0.67
RFFL-211ENST00000584541 CLEC4CQ8WTT0 213 aa19.22■□□□□ 0.67
RFFL-211ENST00000584541 FAM149B1Q96BN6 582 aa19.22■□□□□ 0.67
RFFL-211ENST00000584541 PABPC5Q96DU9 382 aaKnown RBP19.22■□□□□ 0.67
RFFL-211ENST00000584541 MCRS1Q96EZ8 462 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms