RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 LRRIQ3A6PVS8 624 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 C1QTNF9BB2RNN3 333 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 MAPK13O15264 365 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 HCRTO43612 131 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 NFATC1O95644 943 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 FGFR1OPO95684 399 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 MBD3O95983 291 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 C1QTNF9P0C862 333 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 P4HA1P13674 534 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 SPINK2P20155 84 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 PCSK1P29120 753 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 PIK3CAP42336 1068 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 CASP4P49662 377 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 PDE6CP51160 858 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 FKBP3Q00688 224 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 CFAP221Q4G0U5 840 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 COBLL1Q53SF7 1204 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 DCAF17Q5H9S7 520 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 PMS2CLQ68D20 193 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 SCARA3Q6AZY7 606 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 UNQ6494/PRO21346Q6UXR6 183 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 CLEC17AQ6ZS10 378 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 CYP2U1Q7Z449 544 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 CCDC33Q8N5R6 958 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 TOP6BLQ8N6T0 577 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 USP33Q8TEY7 942 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 FUBP3Q96I24 572 aaKnown RBP eCLIP13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 FAM84AQ96KN4 292 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 CLSTN2Q9H4D0 955 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 TMEM9BQ9NQ34 198 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 DMAC2Q9NW81 257 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 GDAP2Q9NXN4 497 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 KIAA1468Q9P260 1216 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 ARHGAP26Q9UNA1 814 aa13.95□□□□□ -0.18
CDK5RAP3-234ENST00000584525 PATE3B3GLJ2 98 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 K7EQS6 105 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 SLC16A3O15427 465 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 BCKDHBP21953 392 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 ATICP31939 592 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 DHPSP49366 369 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 PAK1Q13153 545 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 MORC3Q14149 939 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 ZNF699Q32M78 642 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 UAP1L1Q3KQV9 507 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 C4orf50Q6ZRC1 276 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 SPATA20Q8TB22 786 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 TMC2Q8TDI7 906 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 PARD3BQ8TEW8 1205 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 NELFBQ8WX92 580 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 PIGKQ92643 395 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 CNOT6LQ96LI5 555 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 DNAI2Q9GZS0 605 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 SNX25Q9H3E2 840 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 LMBRD1Q9NUN5 540 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 TRPM5Q9NZQ8 1165 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 MAGEC2Q9UBF1 373 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 ZMIZ1Q9ULJ6 1067 aa13.94□□□□□ -0.18
CDK5RAP3-234ENST00000584525 PTPRJQ12913 1337 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 CACNA1GO43497 2377 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 ANTXRLA6NF34 631 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 LEFTY2O00292 366 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 GABRDO14764 452 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 MAP3K13O43283 966 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 ATP2C2O75185 946 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 ALDH1A2O94788 518 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 CEACAM1P13688 526 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 TCF3P15923 654 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 GRIK1P39086 918 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 OPRD1P41143 372 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 MAGEA11P43364 429 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 PSMC1P62191 440 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 IRX4P78413 519 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 NCOA4Q13772 614 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 SOWAHAQ2M3V2 549 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 WDR72Q3MJ13 1102 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 ZNF667Q5HYK9 610 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 FAM171BQ6P995 826 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 RASSF3Q86WH2 238 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 CREBRFQ8IUR6 639 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 MDGA1Q8NFP4 955 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 CXorf38Q8TB03 319 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 SPATA18Q8TC71 538 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 TMEM174Q8WUU8 243 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 MYLPFQ96A32 169 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 SPATA17Q96L03 361 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 NXF1Q9UBU9 619 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 SIX4Q9UIU6 781 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 FRYQ5TBA9 3013 aa13.93□□□□□ -0.18
CDK5RAP3-234ENST00000584525 SCN1AP35498 2009 aa13.92□□□□□ -0.18
CDK5RAP3-234ENST00000584525 TRIM49BA6NDI0 452 aa13.92□□□□□ -0.18
CDK5RAP3-234ENST00000584525 CDX4O14627 284 aaPredicted RBP13.92□□□□□ -0.18
CDK5RAP3-234ENST00000584525 IKBKBO14920 756 aa13.92□□□□□ -0.18
CDK5RAP3-234ENST00000584525 TOP3BO95985 862 aaKnown RBP13.92□□□□□ -0.18
CDK5RAP3-234ENST00000584525 ABL1P00519 1130 aa13.92□□□□□ -0.18
CDK5RAP3-234ENST00000584525 PDGFRBP09619 1106 aa13.92□□□□□ -0.18
CDK5RAP3-234ENST00000584525 TRIM49P0CI25 452 aa13.92□□□□□ -0.18
CDK5RAP3-234ENST00000584525 TRIM49CP0CI26 452 aa13.92□□□□□ -0.18
CDK5RAP3-234ENST00000584525 CSRP1P21291 193 aaKnown RBP13.92□□□□□ -0.18
CDK5RAP3-234ENST00000584525 BDNFP23560 247 aa13.92□□□□□ -0.18
CDK5RAP3-234ENST00000584525 LMO2P25791 158 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms