RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 TDRD10Q5VZ19 366 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 THOC7Q6I9Y2 204 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GPAT2Q6NUI2 795 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ARHGAP22Q7Z5H3 698 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ECHDC2Q86YB7 292 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ANKLE1Q8NAG6 615 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 DNERQ8NFT8 737 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SAYSD1Q9NPB0 183 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 KCNH4Q9UQ05 1017 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ARIH2O95376 493 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GHRP10912 638 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ATP4AP20648 1035 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 DNAJB2P25686 324 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 IVDP26440 423 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GPC3P51654 580 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NRLP54845 237 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 COPS2P61201 443 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 DYNLT1P63172 113 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CLEC16AQ2KHT3 1053 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 IZUMO3Q5VZ72 239 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NCCRP1Q6ZVX7 275 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ZNF365Q70YC5 407 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CDR2LQ86X02 465 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 RNF168Q8IYW5 571 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 OR5B17Q8NGF7 314 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ASAP3Q8TDY4 903 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PPP1R16BQ96T49 567 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PITPNM3Q9BZ71 974 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PARP2Q9UGN5 583 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 LRRIQ4A6NIV6 560 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 LYPLA2O95372 231 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 VNN1O95497 513 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 HUNKP57058 714 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PLCB3Q01970 1234 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 OVGP1Q12889 678 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MOGSQ13724 837 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ITIH4Q14624 930 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ACAD10Q6JQN1 1059 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ABHD15Q6UXT9 468 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GALNT6Q8NCL4 622 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PPP1R13LQ8WUF5 828 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SCG3Q8WXD2 468 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SNF8Q96H20 258 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TARS2Q9BW92 718 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CYP26B1Q9NR63 512 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NKX1-2Q9UD57 310 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ZMYND8Q9ULU4 1186 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ATP8B3O60423 1300 aa12.1□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CBX6O95503 412 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 HLA-DRAP01903 254 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TXNP10599 105 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 KRT15P19012 456 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SLC8A1P32418 973 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 S100A5P33763 92 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SERPINB4P48594 390 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 WDR4P57081 412 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SMAD4Q13485 552 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 INAQ16352 499 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PPP2R5EQ16537 467 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 LRRC23Q53EV4 343 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 DSTYKQ6XUX3 929 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 DGLUCYQ7Z3D6 616 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 VSIG1Q86XK7 387 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GPD1LQ8N335 351 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GPRC5AQ8NFJ5 357 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ADAMTS19Q8TE59 1207 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 BRI3BPQ8WY22 251 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MFSD14AQ96MC6 490 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ZNF570Q96NI8 536 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 DCLK3Q9C098 648 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 BRINP2Q9C0B6 783 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 VPS37BQ9H9H4 285 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CARD8Q9Y2G2 431 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 A0A1W2PPM1 405 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 FAM221BA6H8Z2 402 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 P4HA2O15460 535 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SUPT20HL2P0C7V6 817 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 STAT5BP51692 787 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 HADHBP55084 474 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 EFTUD2Q15029 972 aaKnown RBP eCLIP12.09□□□□□ -0.477e-16■□□□□ 10
CDK5RAP3-231ENST00000584063 WDR45BQ5MNZ6 344 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TXNRD3NBQ6F5E7 133 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TMEM270Q6UE05 265 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 DPP9Q86TI2 863 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MCOLN2Q8IZK6 566 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SPATA33Q96N06 139 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 RBM15Q96T37 977 aaKnown RBP eCLIP12.09□□□□□ -0.471e-6■■■□□ 17.1
CDK5RAP3-231ENST00000584063 MYLK2Q9H1R3 596 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 POLMQ9NP87 494 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NKIRAS1Q9NYS0 192 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 DCTN4Q9UJW0 460 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GRID1Q9ULK0 1009 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 OTOFQ9HC10 1997 aa12.09□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SLC25A27O95847 323 aa12.08□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ITGBL1O95965 494 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-231ENST00000584063 GNRH1P01148 92 aa12.08□□□□□ -0.48
CDK5RAP3-231ENST00000584063 HNRNPCP07910 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TNFSF9P41273 254 aa12.08□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MSH2P43246 934 aa12.08□□□□□ -0.48
CDK5RAP3-231ENST00000584063 LIG4P49917 911 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms