RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 FBXO27Q8NI29 283 aa11□□□□□ -0.65
RNF43-207ENST00000583753 GDPD5Q8WTR4 605 aa11□□□□□ -0.65
RNF43-207ENST00000583753 APOPT1Q96IL0 206 aa11□□□□□ -0.65
RNF43-207ENST00000583753 MPP4Q96JB8 637 aa11□□□□□ -0.65
RNF43-207ENST00000583753 ZNF333Q96JL9 665 aa11□□□□□ -0.65
RNF43-207ENST00000583753 DNAJC1Q96KC8 554 aaKnown RBP11□□□□□ -0.65
RNF43-207ENST00000583753 RPF1Q9H9Y2 349 aaKnown RBP11□□□□□ -0.65
RNF43-207ENST00000583753 SAR1AQ9NR31 198 aa11□□□□□ -0.65
RNF43-207ENST00000583753 TAGLN3Q9UI15 199 aa11□□□□□ -0.65
RNF43-207ENST00000583753 RABGEF1Q9UJ41 708 aa11□□□□□ -0.65
RNF43-207ENST00000583753 TELO2Q9Y4R8 837 aa11□□□□□ -0.65
RNF43-207ENST00000583753 ACTL7BQ9Y614 415 aa11□□□□□ -0.65
RNF43-207ENST00000583753 PDE4DIPQ5VU43 2346 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 HNRNPCL1O60812 293 aaKnown RBP10.99□□□□□ -0.65
RNF43-207ENST00000583753 LDHAP00338 332 aaKnown RBP10.99□□□□□ -0.65
RNF43-207ENST00000583753 ICAM1P05362 532 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 ZBTB48P10074 688 aaPredicted RBP10.99□□□□□ -0.65
RNF43-207ENST00000583753 UNGP13051 313 aaPredicted RBP10.99□□□□□ -0.65
RNF43-207ENST00000583753 CAP2P40123 477 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 CCNFP41002 786 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 GLRBP48167 497 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 NUDT2P50583 147 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 COPAP53621 1224 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 PKNOX1P55347 436 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 MYBPC2Q14324 1141 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 PGM5Q15124 567 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 DNAL1Q4LDG9 190 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 FASTKD1Q53R41 847 aaKnown RBP10.99□□□□□ -0.65
RNF43-207ENST00000583753 KRT80Q6KB66 452 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 TMEM130Q8N3G9 435 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 RNF34Q969K3 372 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 PDP2Q9P2J9 529 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 USP18Q9UMW8 372 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 PLA2G4CQ9UP65 541 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 MED7O43513 233 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 OAS1P00973 400 aaKnown RBP10.99□□□□□ -0.65
RNF43-207ENST00000583753 ADORA2BP29275 332 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 SDC4P31431 198 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 PHKA2P46019 1235 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 GTF2A2P52657 109 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 ACVR2BQ13705 512 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 ITGA9Q13797 1035 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 RNASEH2BQ5TBB1 312 aaKnown RBP10.99□□□□□ -0.65
RNF43-207ENST00000583753 C4orf19Q8IY42 314 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 OR6B3Q8NGW1 331 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 NSUN6Q8TEA1 469 aaKnown RBP10.99□□□□□ -0.65
RNF43-207ENST00000583753 MARK4Q96L34 752 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 TUBGCP5Q96RT8 1024 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 NIF3L1Q9GZT8 377 aa10.99□□□□□ -0.65
RNF43-207ENST00000583753 PARP4Q9UKK3 1724 aaKnown RBP10.99□□□□□ -0.65
RNF43-207ENST00000583753 TM9SF1O15321 606 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 USP12O75317 370 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 HNRNPCP07910 306 aaKnown RBP eCLIP10.98□□□□□ -0.654e-8■■□□□ 11.8
RNF43-207ENST00000583753 GJB1P08034 283 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 LCP1P13796 627 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 RAG1P15918 1043 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 GMPRP36959 345 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 GRIK3Q13003 919 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 DYNC1I2Q13409 638 aaKnown RBP10.98□□□□□ -0.65
RNF43-207ENST00000583753 ZACNQ401N2 412 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 EFHC1Q5JVL4 640 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 DACT2Q5SW24 774 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 CWF19L1Q69YN2 538 aaKnown RBP10.98□□□□□ -0.65
RNF43-207ENST00000583753 HEATR6Q6AI08 1181 aaKnown RBP10.98□□□□□ -0.65
RNF43-207ENST00000583753 MON1BQ7L1V2 547 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 PHF12Q96QT6 1004 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 SYT11Q9BT88 431 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 TRPV6Q9H1D0 765 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 RNPEPQ9H4A4 650 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 ACSS3Q9H6R3 686 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 SLC38A10Q9HBR0 1119 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 XAB2Q9HCS7 855 aaKnown RBP10.98□□□□□ -0.65
RNF43-207ENST00000583753 ANKEF1Q9NU02 776 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 STRIP2Q9ULQ0 834 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 NENFQ9UMX5 172 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 AKT3Q9Y243 479 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 PDGFRBP09619 1106 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 KDELR1P24390 212 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 HADHBP55084 474 aaKnown RBP10.98□□□□□ -0.65
RNF43-207ENST00000583753 YWHAEP62258 255 aaKnown RBP10.98□□□□□ -0.65
RNF43-207ENST00000583753 OGDHQ02218 1023 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 C1QBPQ07021 282 aaKnown RBP10.98□□□□□ -0.65
RNF43-207ENST00000583753 N4BP2L1Q5TBK1 243 aaPredicted RBP10.98□□□□□ -0.65
RNF43-207ENST00000583753 SH3PXD2AQ5TCZ1 1133 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 ARHGAP22Q7Z5H3 698 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 NIM1KQ8IY84 436 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 C7orf43Q8WVR3 580 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 TRAPPC12Q8WVT3 735 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 RXFP2Q8WXD0 754 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 EXT2Q93063 718 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 GRIP2Q9C0E4 1043 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 PPM1HQ9ULR3 514 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 APOL1O14791 398 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 PRPF4O43172 522 aaKnown RBP eCLIP10.98□□□□□ -0.653e-6■■□□□ 12
RNF43-207ENST00000583753 LYNP07948 512 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 FGFR1P11362 822 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 MX2P20592 715 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 WNT7BP56706 349 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 MFN1Q8IWA4 741 aa10.98□□□□□ -0.65
RNF43-207ENST00000583753 ZSCAN18Q8TBC5 510 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms