RNA–Protein interactions for RNA: ENST00000583085.1

STRADA-222, Transcript of STE20-related kinase adaptor alpha, human

Gene STRADA, Length 3,685 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-222	ENST00000583085	PCDH9	Q9HC56	1237 aa		12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	HEY1	Q9Y5J3	304 aa		12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	PRPSAP2	O60256	369 aa		12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	IL4R	P24394	825 aa		12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	GCA	P28676	217 aa		12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	TKT	P29401	623 aa	Known RBP	12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	FSCN1	Q16658	493 aa	Known RBP	12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	TWF2	Q6IBS0	349 aa	Known RBP	12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	CPLX4	Q7Z7G2	160 aa		12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	BBOF1	Q8ND07	529 aa		12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	GDAP1	Q8TB36	358 aa		12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	SERPINB12	Q96P63	405 aa		12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	ROPN1B	Q9BZX4	212 aa	Predicted RBP	12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	ARHGAP39	Q9C0H5	1083 aa		12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	ROPN1	Q9HAT0	212 aa	Predicted RBP	12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	MYO18A	Q92614	2054 aa	Known RBP	12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	MKI67	P46013	3256 aa	Known RBP	12.7	□□□□□ -0.38
STRADA-222	ENST00000583085	HAS3	O00219	553 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	CLDN5	O00501	218 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	PIR	O00625	290 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	TMEM63A	O94886	807 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	DRD4	P21917	467 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	GNL1	P36915	607 aa	Predicted RBP	12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	EFTUD2	Q15029	972 aa	Known RBP eCLIP	12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	SPRED3	Q2MJR0	410 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	TRPV1	Q8NER1	839 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	WDR83	Q9BRX9	315 aa	Known RBP	12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	AP5M1	Q9H0R1	490 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	HESX1	Q9UBX0	185 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	NR2E3	Q9Y5X4	410 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	PGK1	P00558	417 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	BASP1	P80723	227 aa	Known RBP	12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	SLC6A3	Q01959	620 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	CXCL17	Q6UXB2	119 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	LRRC34	Q8IZ02	419 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	ZNF317	Q96PQ6	595 aa	Predicted RBP	12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	MAK16	Q9BXY0	300 aa	Known RBP	12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	SLC4A5	Q9BY07	1137 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	UBQLN1	Q9UMX0	589 aa	Known RBP	12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	EXOC1L	A0A1B0GW35	172 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	C17orf102	A2RUQ5	167 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	APOC4-APOC2	K7ER74	178 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	TNPO2	O14787	897 aa	Known RBP	12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	APOC2	P02655	101 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	SSTR1	P30872	391 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	CPT1A	P50416	773 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	HDAC4	P56524	1084 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	PURA	Q00577	322 aa	Known RBP	12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	KRT81	Q14533	505 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	RNF187	Q5TA31	235 aa	Predicted RBP	12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	C17orf99	Q6UX52	265 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	OSTM1	Q86WC4	334 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	USP6NL	Q92738	828 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	LPP	Q93052	612 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	CHMP6	Q96FZ7	201 aa		12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	SNRNP25	Q9BV90	132 aa	Known RBP	12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.69	□□□□□ -0.38
STRADA-222	ENST00000583085	BEST1	O76090	585 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	SDC4	P31431	198 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	PCK1	P35558	622 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	MORF4L2	Q15014	288 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	FAXC	Q5TGI0	409 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	DARS2	Q6PI48	645 aa	Known RBP	12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	TMEM110	Q86TL2	294 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	FAM228A	Q86W67	206 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	LRRC52	Q8N7C0	313 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	SEC16B	Q96JE7	1060 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	TMPRSS4	Q9NRS4	437 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	KIAA1257	Q9ULG3	409 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	PTGES	O14684	152 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	AVIL	O75366	819 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	SPAG7	O75391	227 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	RARB	P10826	455 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	BRAF	P15056	766 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	DERA	Q9Y315	318 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	MFHAS1	Q9Y4C4	1052 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	TIMM13	Q9Y5L4	95 aa	Predicted RBP	12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	ZNF236	Q9UL36	1845 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	SYNJ2BP-COX16	A0A087WUM0	186 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	MCF2L	O15068	1137 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	VIM	P08670	466 aa	Known RBP	12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	GPX6	P59796	221 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	PITX1	P78337	314 aa	Predicted RBP	12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	TRIM32	Q13049	653 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	CRHR2	Q13324	411 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	HIF1A	Q16665	826 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	TAOK1	Q7L7X3	1001 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	PQLC3	Q8N755	202 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	PCDH19	Q8TAB3	1148 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	P3H4	Q92791	437 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	RSAD1	Q9HA92	442 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	COX16	Q9P0S2	106 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	TRPM7	Q96QT4	1865 aa		12.68	□□□□□ -0.38
STRADA-222	ENST00000583085	LILRA4	P59901	499 aa		12.67	□□□□□ -0.38
STRADA-222	ENST00000583085	GNAS	Q5JWF2	1037 aa		12.67	□□□□□ -0.38
STRADA-222	ENST00000583085	CTU1	Q7Z7A3	348 aa	Known RBP	12.67	□□□□□ -0.38
STRADA-222	ENST00000583085	PLD5	Q8N7P1	536 aa		12.67	□□□□□ -0.38
STRADA-222	ENST00000583085	APPL2	Q8NEU8	664 aa		12.67	□□□□□ -0.38
STRADA-222	ENST00000583085	CCHCR1	Q8TD31	782 aa		12.67	□□□□□ -0.38
STRADA-222	ENST00000583085	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms