RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 BEST2Q8NFU1 509 aa14.29□□□□□ -0.12
SRSF1-205ENST00000582730 CNPY3Q9BT09 278 aa14.29□□□□□ -0.12
SRSF1-205ENST00000582730 FOXP3Q9BZS1 431 aa14.29□□□□□ -0.12
SRSF1-205ENST00000582730 NSRP1Q9H0G5 558 aaKnown RBP14.29□□□□□ -0.12
SRSF1-205ENST00000582730 A8MXQ7 604 aa14.29□□□□□ -0.12
SRSF1-205ENST00000582730 H7C0C1 242 aa14.29□□□□□ -0.12
SRSF1-205ENST00000582730 CITO14578 2027 aa14.29□□□□□ -0.12
SRSF1-205ENST00000582730 SPAG7O75391 227 aa14.29□□□□□ -0.12
SRSF1-205ENST00000582730 RECQL4O94761 1208 aa14.29□□□□□ -0.12
SRSF1-205ENST00000582730 CELF2O95319 508 aaKnown RBP14.29□□□□□ -0.12
SRSF1-205ENST00000582730 ADORA2BP29275 332 aa14.29□□□□□ -0.12
SRSF1-205ENST00000582730 HOXA11P31270 313 aaPredicted RBP14.29□□□□□ -0.12
SRSF1-205ENST00000582730 ATP5OP48047 213 aa14.29□□□□□ -0.12
SRSF1-205ENST00000582730 FAM133BQ5BKY9 247 aaKnown RBP14.29□□□□□ -0.12
SRSF1-205ENST00000582730 APBB1IPQ7Z5R6 666 aaPredicted RBP14.29□□□□□ -0.12
SRSF1-205ENST00000582730 DNAJB3Q8WWF6 145 aa14.29□□□□□ -0.12
SRSF1-205ENST00000582730 PRCCQ92733 491 aaPredicted RBP14.29□□□□□ -0.12
SRSF1-205ENST00000582730 SHOC2Q9UQ13 582 aa14.29□□□□□ -0.12
SRSF1-205ENST00000582730 GSTA1P08263 222 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 RPL22P35268 128 aaKnown RBP14.28□□□□□ -0.12
SRSF1-205ENST00000582730 BBS9Q3SYG4 887 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 NUGGCQ68CJ6 796 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 IQSEC1Q6DN90 963 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 NOTUMQ6P988 496 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 TTC25Q96NG3 672 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 PTPN18Q99952 460 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 B3GNT5Q9BYG0 378 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 FGFR1OP2Q9NVK5 253 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 HEY1Q9Y5J3 304 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 ANP32DO95626 131 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 GABRB2P47870 512 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 ITIH4Q14624 930 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 PPP6R3Q5H9R7 873 aaPredicted RBP14.28□□□□□ -0.12
SRSF1-205ENST00000582730 TTC30AQ86WT1 665 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 PYROXD1Q8WU10 500 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 LRRN4Q8WUT4 740 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 DPEP3Q9H4B8 488 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 RSAD1Q9HA92 442 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 RRN3P2A6NIE6 340 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 C2CD4BA6NLJ0 364 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 APOC4-APOC2K7ER74 178 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 APOC2P02655 101 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 PFKMP08237 780 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 SDC4P31431 198 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 MPP2Q14168 576 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 FAM110CQ1W6H9 321 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 NT5DC4Q86YG4 428 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 PPIL6Q8IXY8 311 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 C2orf69Q8N8R5 385 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 CMASQ8NFW8 434 aaPredicted RBP14.28□□□□□ -0.12
SRSF1-205ENST00000582730 FAM172AQ8WUF8 416 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 SNX27Q96L92 541 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 ADAMTS10Q9H324 1103 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 KIF9Q9HAQ2 790 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 C15orf41Q9Y2V0 281 aa14.28□□□□□ -0.12
SRSF1-205ENST00000582730 MYL3P08590 195 aa14.27□□□□□ -0.12
SRSF1-205ENST00000582730 SSTR1P30872 391 aa14.27□□□□□ -0.12
SRSF1-205ENST00000582730 ARL4CP56559 192 aa14.27□□□□□ -0.12
SRSF1-205ENST00000582730 ZNF200P98182 395 aaPredicted RBP14.27□□□□□ -0.12
SRSF1-205ENST00000582730 ROR1Q01973 937 aa14.27□□□□□ -0.12
SRSF1-205ENST00000582730 RIPK1Q13546 671 aa14.27□□□□□ -0.12
SRSF1-205ENST00000582730 ZC3H12AQ5D1E8 599 aaKnown RBP14.27□□□□□ -0.12
SRSF1-205ENST00000582730 C4orf33Q8N1A6 199 aa14.27□□□□□ -0.12
SRSF1-205ENST00000582730 TTC39CQ8N584 583 aa14.27□□□□□ -0.12
SRSF1-205ENST00000582730 CPT1BQ92523 772 aa14.27□□□□□ -0.12
SRSF1-205ENST00000582730 GOLGA2P5Q9HBQ8 144 aa14.27□□□□□ -0.12
SRSF1-205ENST00000582730 KIAA1257Q9ULG3 409 aa14.27□□□□□ -0.12
SRSF1-205ENST00000582730 EFR3BQ9Y2G0 817 aa14.27□□□□□ -0.12
SRSF1-205ENST00000582730 SLC45A1Q9Y2W3 748 aa14.27□□□□□ -0.12
SRSF1-205ENST00000582730 TCRBV7S3A2A0A539 114 aa14.27□□□□□ -0.13
SRSF1-205ENST00000582730 CCDC130P13994 396 aa14.27□□□□□ -0.13
SRSF1-205ENST00000582730 BEX3Q00994 111 aa14.27□□□□□ -0.13
SRSF1-205ENST00000582730 SPRYD7Q5W111 196 aa14.27□□□□□ -0.13
SRSF1-205ENST00000582730 TRPM8Q7Z2W7 1104 aa14.27□□□□□ -0.13
SRSF1-205ENST00000582730 PCGF5Q86SE9 256 aa14.27□□□□□ -0.13
SRSF1-205ENST00000582730 TLK2Q86UE8 772 aa14.27□□□□□ -0.13
SRSF1-205ENST00000582730 RELL1Q8IUW5 271 aa14.27□□□□□ -0.13
SRSF1-205ENST00000582730 AGAP11Q8TF27 550 aa14.27□□□□□ -0.13
SRSF1-205ENST00000582730 SLC5A4Q9NY91 659 aa14.27□□□□□ -0.13
SRSF1-205ENST00000582730 XPO7Q9UIA9 1087 aaKnown RBP14.27□□□□□ -0.13
SRSF1-205ENST00000582730 GGT7Q9UJ14 662 aa14.27□□□□□ -0.13
SRSF1-205ENST00000582730 SCN1AP35498 2009 aa14.27□□□□□ -0.13
SRSF1-205ENST00000582730 TRIP11Q15643 1979 aa14.27□□□□□ -0.13
SRSF1-205ENST00000582730 HGSO14964 777 aaPredicted RBP14.26□□□□□ -0.13
SRSF1-205ENST00000582730 GPR32O75388 356 aa14.26□□□□□ -0.13
SRSF1-205ENST00000582730 ABHD2P08910 425 aa14.26□□□□□ -0.13
SRSF1-205ENST00000582730 LCP1P13796 627 aa14.26□□□□□ -0.13
SRSF1-205ENST00000582730 DESP17661 470 aa14.26□□□□□ -0.13
SRSF1-205ENST00000582730 PCK1P35558 622 aa14.26□□□□□ -0.13
SRSF1-205ENST00000582730 CCNHP51946 323 aaPredicted RBP14.26□□□□□ -0.13
SRSF1-205ENST00000582730 ACAP1Q15027 740 aa14.26□□□□□ -0.13
SRSF1-205ENST00000582730 FNBP1LQ5T0N5 605 aa14.26□□□□□ -0.13
SRSF1-205ENST00000582730 ABCF3Q9NUQ8 709 aa14.26□□□□□ -0.13
SRSF1-205ENST00000582730 TCEA3O75764 348 aa14.26□□□□□ -0.13
SRSF1-205ENST00000582730 MFSD10Q14728 455 aa14.26□□□□□ -0.13
SRSF1-205ENST00000582730 EFTUD2Q15029 972 aaKnown RBP eCLIP14.26□□□□□ -0.134e-14■■□□□ 12.8
SRSF1-205ENST00000582730 PKN2Q16513 984 aaKnown RBP14.26□□□□□ -0.13
SRSF1-205ENST00000582730 CCDC14Q49A88 953 aa14.26□□□□□ -0.13
SRSF1-205ENST00000582730 ARHGEF18Q6ZSZ5 1173 aa14.26□□□□□ -0.13
SRSF1-205ENST00000582730 PALM2Q8IXS6 379 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms