RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 GPS1Q13098 491 aa10.56□□□□□ -0.72
TRAPPC8-211ENST00000582539 ZSCAN26Q16670 478 aa10.56□□□□□ -0.72
TRAPPC8-211ENST00000582539 MRPL10Q7Z7H8 261 aaKnown RBP10.56□□□□□ -0.72
TRAPPC8-211ENST00000582539 RXFP2Q8WXD0 754 aa10.56□□□□□ -0.72
TRAPPC8-211ENST00000582539 CD101Q93033 1021 aa10.56□□□□□ -0.72
TRAPPC8-211ENST00000582539 GCNAQ96QF7 691 aa10.56□□□□□ -0.72
TRAPPC8-211ENST00000582539 SRPK1Q96SB4 655 aaKnown RBP10.56□□□□□ -0.72
TRAPPC8-211ENST00000582539 BFARQ9NZS9 450 aa10.56□□□□□ -0.72
TRAPPC8-211ENST00000582539 SRRDQ9UH36 339 aa10.56□□□□□ -0.72
TRAPPC8-211ENST00000582539 PACSIN2Q9UNF0 486 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC8-211ENST00000582539 IPPQ9Y573 584 aa10.56□□□□□ -0.72
TRAPPC8-211ENST00000582539 hCG_1818297A0A087WSY0 165 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 TRUB2O95900 331 aaKnown RBP10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 PTPN1P18031 435 aaKnown RBP10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 KDELR1P24390 212 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 PPP3CCP48454 512 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 CARSP49589 748 aaKnown RBP10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 TPI1P60174 286 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 CCDC38Q502W7 563 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 C6orf163Q5TEZ5 329 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 ATG16L1Q676U5 607 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 DPY19L2P1Q6NXN4 242 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 ILDR2Q71H61 639 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 TMEM110Q86TL2 294 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 HSPH1Q92598 858 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 SERPINB11Q96P15 392 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 ATXN2Q99700 1313 aaKnown RBP10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 SH3GL2Q99962 352 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 SSU72Q9NP77 194 aaKnown RBP10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 KCNK9Q9NPC2 374 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 FAM53CQ9NYF3 392 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 ANXA9O76027 345 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 HSD17B3P37058 310 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 MFSD5Q6N075 450 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 ALLCQ8N6M5 410 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 PPP1R14CQ8TAE6 165 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 SMIM28A0A1B0GU29 152 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 CST8O60676 142 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 ZWINTO95229 277 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 GJA5P36382 358 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 PRKAA2P54646 552 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 NAA20P61599 178 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 SAPCD2Q86UD0 394 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 CCDC197Q8NCU1 140 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 TRAPPC12Q8WVT3 735 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 APOBEC3GQ9HC16 384 aaKnown RBP10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 TRPC7Q9HCX4 862 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 SAYSD1Q9NPB0 183 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 ABCC13Q9NSE7 274 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 ZMYM5Q9UJ78 669 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 PTPN22Q9Y2R2 807 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 PCDHB5Q9Y5E4 795 aa10.55□□□□□ -0.72
TRAPPC8-211ENST00000582539 PDE2AO00408 941 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 LIASO43766 372 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 RARAP10276 462 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 RBP3P10745 1247 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 PYGMP11217 842 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 ADORA2BP29275 332 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 TNFSF9P41273 254 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 MATKP42679 507 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 FAM26DQ5JW98 314 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 SPOPLQ6IQ16 392 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 METTL3Q86U44 580 aaKnown RBP10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 LCA5Q86VQ0 697 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 XYLT1Q86Y38 959 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 PRELID2Q8N945 189 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 B3GALNT2Q8NCR0 500 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 NPLOC4Q8TAT6 608 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 PLEKHO2Q8TD55 490 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 TFB1MQ8WVM0 346 aaKnown RBP10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 WNT8BQ93098 351 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 SENP8Q96LD8 212 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 UXTQ9UBK9 157 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 NEU2Q9Y3R4 380 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 EEF2KO00418 725 aaKnown RBP10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 H2AFYO75367 372 aaKnown RBP10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 TADA2AO75478 443 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 APOA4P06727 396 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 CYBAP13498 195 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 CES1P23141 567 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 MDH1P40925 334 aaKnown RBP10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 MAGEA4P43358 317 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 NAPEPLDQ6IQ20 393 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 SLC24A5Q71RS6 500 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 SERINC5Q86VE9 423 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 NDUFAF2Q8N183 169 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 MCUQ8NE86 351 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 PPM1EQ8WY54 764 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 KAT5Q92993 513 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 TTC1Q99614 292 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 DHX35Q9H5Z1 703 aaKnown RBP10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 KLHL14Q9P2G3 628 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 DMGDHQ9UI17 866 aaKnown RBP10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 AAR2Q9Y312 384 aaKnown RBP10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 SBF1O95248 1867 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 AP1G2O75843 785 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 FGF19O95750 216 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 MT-ND3P03897 115 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 SCARA3Q6AZY7 606 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 DENND1BQ6P3S1 775 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms