RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 MYO16Q9Y6X6 1858 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 REV3LO60673 3130 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 TCRBV5S1A1TA0A578 114 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 TMCO5BA8MYB1 307 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 RFPL2O75678 378 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 ZBED1O96006 694 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 GLI1P08151 1106 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 TMEM253P0C7T8 217 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 HOXB8P17481 243 aaPredicted RBP12.1□□□□□ -0.47
GGA3-211ENST00000582232 YWHAQP27348 245 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 MAGEA1P43355 309 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 EPHA5P54756 1037 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 DAOAP59103 153 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 USP46P62068 366 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 MRPS5P82675 430 aaKnown RBP12.1□□□□□ -0.47
GGA3-211ENST00000582232 TCEAL1Q15170 157 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 PLEKHA7Q6IQ23 1121 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 LLGL2Q6P1M3 1020 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 ZNF662Q6ZS27 426 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 BEND5Q7L4P6 421 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 BHLHA9Q7RTU4 235 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 SCUBE3Q8IX30 993 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 SIX6OS1Q8N1H7 587 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 ELMOD1Q8N336 334 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 TXLNBQ8N3L3 684 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 C3orf20Q8ND61 904 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 GPR152Q8TDT2 470 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 GIPC2Q8TF65 315 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 ZNF707Q96C28 371 aaPredicted RBP12.1□□□□□ -0.47
GGA3-211ENST00000582232 ZNF512Q96ME7 567 aaPredicted RBP12.1□□□□□ -0.47
GGA3-211ENST00000582232 FAM161BQ96MY7 647 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 CDX2Q99626 313 aaPredicted RBP12.1□□□□□ -0.47
GGA3-211ENST00000582232 C11orf70Q9BRQ4 267 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 LRRC3Q9BY71 257 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 PRKD2Q9BZL6 878 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 ULBP1Q9BZM6 244 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 IGFLR1Q9H665 355 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 SYNCQ9H7C4 482 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 SFXN1Q9H9B4 322 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 ASNSD1Q9NWL6 643 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 TJP2Q9UDY2 1190 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 REXO2Q9Y3B8 237 aaKnown RBP12.1□□□□□ -0.47
GGA3-211ENST00000582232 NOTCH4Q99466 2003 aa12.1□□□□□ -0.47
GGA3-211ENST00000582232 ANAPC1Q9H1A4 1944 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 OBSL1O75147 1896 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 PJA2O43164 708 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 XYLBO75191 536 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 CYP1A2P05177 515 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 USP17L7P0C7H9 530 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 ZDHHC11BP0C7U3 371 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 LCP1P13796 627 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 IGFBP4P22692 258 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 PPP3CCP48454 512 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 PSEN1P49768 467 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 VAV2P52735 878 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 GPC5P78333 572 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 RBM10P98175 930 aaKnown RBP12.09□□□□□ -0.47
GGA3-211ENST00000582232 SLC6A3Q01959 620 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 MTMR3Q13615 1198 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 EFHC1Q5JVL4 640 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 PPP1R15BQ5SWA1 713 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 SNX30Q5VWJ9 437 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 ANKRD54Q6NXT1 300 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 OLFML1Q6UWY5 402 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 TOGARAM2Q6ZUX3 1019 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 FAM183BPQ6ZVS7 135 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 Q7L0L9 218 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 SLC26A9Q7LBE3 791 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 MON1AQ86VX9 555 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 TMC8Q8IU68 726 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 ZNF276Q8N554 614 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 DEFB123Q8N688 67 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 LEMD2Q8NC56 503 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 PDZD8Q8NEN9 1154 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 CTNNBL1Q8WYA6 563 aaPredicted RBP12.09□□□□□ -0.47
GGA3-211ENST00000582232 KHSRPQ92945 711 aaKnown RBP eCLIP12.09□□□□□ -0.47
GGA3-211ENST00000582232 PABPC5Q96DU9 382 aaKnown RBP12.09□□□□□ -0.47
GGA3-211ENST00000582232 ZNF830Q96NB3 372 aaPredicted RBP12.09□□□□□ -0.47
GGA3-211ENST00000582232 GUCD1Q96NT3 240 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 SLITRK1Q96PX8 696 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 PACSIN1Q9BY11 444 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 THAP2Q9H0W7 228 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 PARVAQ9NVD7 372 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 MTMR10Q9NXD2 777 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 DOCK6Q96HP0 2047 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 C2orf16Q68DN1 1984 aa12.09□□□□□ -0.47
GGA3-211ENST00000582232 A0A0A6YYK5 440 aaPredicted RBP12.08□□□□□ -0.48
GGA3-211ENST00000582232 CCDC195A0A1B0GUA6 201 aa12.08□□□□□ -0.48
GGA3-211ENST00000582232 SIGLEC16A6NMB1 481 aa12.08□□□□□ -0.48
GGA3-211ENST00000582232 BTNL10A8MVZ5 291 aa12.08□□□□□ -0.48
GGA3-211ENST00000582232 PIK3R2O00459 728 aa12.08□□□□□ -0.48
GGA3-211ENST00000582232 CCL16O15467 120 aa12.08□□□□□ -0.48
GGA3-211ENST00000582232 LINC01565O15544 149 aa12.08□□□□□ -0.48
GGA3-211ENST00000582232 FGF19O95750 216 aa12.08□□□□□ -0.48
GGA3-211ENST00000582232 F11P03951 625 aa12.08□□□□□ -0.48
GGA3-211ENST00000582232 CCDC175P0C221 793 aa12.08□□□□□ -0.48
GGA3-211ENST00000582232 PTPN2P17706 415 aa12.08□□□□□ -0.48
GGA3-211ENST00000582232 RRM1P23921 792 aa12.08□□□□□ -0.48
GGA3-211ENST00000582232 TAF10Q12962 218 aa12.08□□□□□ -0.48
GGA3-211ENST00000582232 MAMLD1Q13495 774 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms