RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 C16orf59Q7L2K0 433 aa15.33■□□□□ 0.04
MKS1-211ENST00000581761 PIGZQ86VD9 579 aa15.33■□□□□ 0.04
MKS1-211ENST00000581761 SCUBE3Q8IX30 993 aa15.33■□□□□ 0.04
MKS1-211ENST00000581761 HASPINQ8TF76 798 aa15.33■□□□□ 0.04
MKS1-211ENST00000581761 GRK7Q8WTQ7 553 aa15.33■□□□□ 0.04
MKS1-211ENST00000581761 CLEC4CQ8WTT0 213 aa15.33■□□□□ 0.04
MKS1-211ENST00000581761 B3GNT5Q9BYG0 378 aa15.33■□□□□ 0.04
MKS1-211ENST00000581761 NEUROG2Q9H2A3 272 aa15.33■□□□□ 0.04
MKS1-211ENST00000581761 KRT82Q9NSB4 513 aa15.33■□□□□ 0.04
MKS1-211ENST00000581761 FAM153AQ9UHL3 310 aa15.33■□□□□ 0.04
MKS1-211ENST00000581761 DSEQ9UL01 958 aa15.33■□□□□ 0.04
MKS1-211ENST00000581761 USP18Q9UMW8 372 aa15.33■□□□□ 0.04
MKS1-211ENST00000581761 SNX24Q9Y343 169 aa15.33■□□□□ 0.04
MKS1-211ENST00000581761 TDRD15B5MCY1 1934 aaKnown RBP15.33■□□□□ 0.04
MKS1-211ENST00000581761 ARHGEF37A1IGU5 675 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 PRPSAP2O60256 369 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 TJP3O95049 919 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 KDELR1P24390 212 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 CDKN2BP42772 138 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 CCL23P55773 120 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 PLCB3Q01970 1234 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 GPNMBQ14956 572 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 PPP1R7Q15435 360 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 CCNG2Q16589 344 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 NOMO2Q5JPE7 1267 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 KCNT1Q5JUK3 1230 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 CLLU1OSQ5K130 101 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 PAQR9Q6ZVX9 377 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 SLC26A9Q7LBE3 791 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 FAM35AQ86V20 835 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 RSPH1Q8WYR4 309 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 HSPH1Q92598 858 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 SEPT8Q92599 483 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 KHSRPQ92945 711 aaKnown RBP eCLIP15.32■□□□□ 0.04
MKS1-211ENST00000581761 LRCH3Q96II8 777 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 CCDC114Q96M63 670 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 LRRC4Q9HBW1 653 aa15.32■□□□□ 0.04
MKS1-211ENST00000581761 MYBPHLA2RUH7 354 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 C3orf70A6NLC5 250 aaPredicted RBP15.31■□□□□ 0.04
MKS1-211ENST00000581761 M0QZQ0 153 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 NBNO60934 754 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 AP1G2O75843 785 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 CYP11A1P05108 521 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 CSF2RAP15509 400 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 GBP1P32455 592 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 DRG2P55039 364 aaKnown RBP15.31■□□□□ 0.04
MKS1-211ENST00000581761 ATP11AP98196 1134 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 KRT17Q04695 432 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 ADIGQ0VDE8 80 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 TFDP3Q5H9I0 405 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 EFHC1Q5JVL4 640 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 SH3PXD2AQ5TCZ1 1133 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 CLEC20AQ6ZU45 233 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 SYDE1Q6ZW31 735 aaPredicted RBP15.31■□□□□ 0.04
MKS1-211ENST00000581761 MREGQ8N565 214 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 KCTD6Q8NC69 237 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 TSEN2Q8NCE0 465 aaKnown RBP15.31■□□□□ 0.04
MKS1-211ENST00000581761 DBF4BQ8NFT6 615 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 ATL2Q8NHH9 583 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 MYCBPAPQ8TBZ2 947 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 FAM172AQ8WUF8 416 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 KCTD13Q8WZ19 329 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 SLCO2A1Q92959 643 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 MYLPFQ96A32 169 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 SCLYQ96I15 445 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 SUSD3Q96L08 255 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 CFAP57Q96MR6 1250 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 FAM193BQ96PV7 902 aaPredicted RBP15.31■□□□□ 0.04
MKS1-211ENST00000581761 PEBP4Q96S96 227 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 NCAPGQ9BPX3 1015 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 FAM118BQ9BPY3 351 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 UBXN6Q9BZV1 441 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 NGRNQ9NPE2 291 aaKnown RBP15.31■□□□□ 0.04
MKS1-211ENST00000581761 TMEM161AQ9NX61 479 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 KANSL3Q9P2N6 904 aa15.31■□□□□ 0.04
MKS1-211ENST00000581761 FEZ2Q9UHY8 353 aaPredicted RBP15.31■□□□□ 0.04
MKS1-211ENST00000581761 ENPP3O14638 875 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 HSF2BPO75031 334 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 DAB1O75553 588 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 BEST1O76090 585 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 GAS8O95995 478 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 TYMPP19971 482 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 OAS2P29728 719 aaKnown RBP15.3■□□□□ 0.04
MKS1-211ENST00000581761 HSPA9P38646 679 aaKnown RBP15.3■□□□□ 0.04
MKS1-211ENST00000581761 PTPN9P43378 593 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 RPL21P46778 160 aaKnown RBP15.3■□□□□ 0.04
MKS1-211ENST00000581761 CDR1P51861 262 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 MAP3K7CLP57077 242 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 FAM193AP78312 1265 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 ADCY2Q08462 1091 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 PTK6Q13882 451 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 KRT81Q14533 505 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 RAB6CQ53S08 254 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 PLEKHG4Q58EX7 1191 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 INTS6LQ5JSJ4 861 aaKnown RBP15.3■□□□□ 0.04
MKS1-211ENST00000581761 C9orf50Q5SZB4 431 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 OVOS1Q6IE37 1185 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 SCYL2Q6P3W7 929 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 ZNF280BQ86YH2 543 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 RFX6Q8HWS3 928 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms