RNA–Protein interactions for RNA: ENST00000581523.5

MSI2-213, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-213	ENST00000581523	CST5	P28325	142 aa	Predicted RBP	4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	MAP2K6	P52564	334 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	OAZ1	P54368	228 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	GP2	P55259	537 aa	Known RBP	4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	CCL23	P55773	120 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	TNFAIP2	Q03169	654 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	CD69	Q07108	199 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	DHX8	Q14562	1220 aa	Known RBP	4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	NOMO1	Q15155	1222 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	WDR72	Q3MJ13	1102 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	USH1G	Q495M9	461 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	C19orf54	Q5BKX5	351 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	PHF19	Q5T6S3	580 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	MAMDC4	Q6UXC1	1216 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	ZNF605	Q86T29	641 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	FAM160B2	Q86V87	743 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	DRC7	Q8IY82	874 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	FAM186B	Q8IYM0	893 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	MSL3	Q8N5Y2	521 aa	Known RBP	4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	FAM133A	Q8N9E0	248 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	KLHDC9	Q8NEP7	349 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	CHST13	Q8NET6	341 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	KAT5	Q92993	513 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	NKD2	Q969F2	451 aa	Predicted RBP	4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	CDK5RAP3	Q96JB5	506 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	WDR92	Q96MX6	357 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	SYT3	Q9BQG1	590 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	KATNBL1	Q9H079	304 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	HIPK3	Q9H422	1215 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	SIRT5	Q9NXA8	310 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523		Q9UFV3	132 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	FBXO40	Q9UH90	709 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	PUF60	Q9UHX1	559 aa	Known RBP	4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	TBX21	Q9UL17	535 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	PCDHA13	Q9Y5I0	950 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523		A0A0C4DFX4	3053 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	CCDC171	Q6TFL3	1326 aa		4.97	□□□□□ -1.61
MSI2-213	ENST00000581523	PTPRS	Q13332	1948 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	CTAGE5	O15320	804 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	DHX16	O60231	1041 aa	Known RBP	4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	PHF2	O75151	1096 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	CYP7B1	O75881	506 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	ENDOD1	O94919	500 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	TIMP1	P01033	207 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	FTL	P02792	175 aa	Predicted RBP	4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	MYL3	P08590	195 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	LTA4H	P09960	611 aa	Known RBP	4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	CYP2C9	P11712	490 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	CDR1	P51861	262 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	HK3	P52790	923 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	RABGGTB	P53611	331 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	PDE1A	P54750	535 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	PPIG	Q13427	754 aa	Known RBP eCLIP	4.96	□□□□□ -1.62	1e-23	■■□□□ 11.6
MSI2-213	ENST00000581523	ITGA7	Q13683	1181 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	BAAT	Q14032	418 aa	Predicted RBP	4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	EIF4H	Q15056	248 aa	Known RBP	4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	CNN3	Q15417	329 aa	Known RBP	4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	SWSAP1	Q6NVH7	229 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	MAEA	Q7L5Y9	396 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	OTOP2	Q7RTS6	562 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	ANKRD33	Q7Z3H0	272 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	DEFB128	Q7Z7B8	93 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	DAAM2	Q86T65	1068 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	FAM129C	Q86XR2	697 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	UNC5B	Q8IZJ1	945 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	KY	Q8NBH2	561 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	PCSK9	Q8NBP7	692 aa	Known RBP	4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	OR6J1	Q8NGC5	347 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	PARD3B	Q8TEW8	1205 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	SNX33	Q8WV41	574 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	RGMA	Q96B86	450 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	EVI5L	Q96CN4	794 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	TMEM47	Q9BQJ4	181 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	TRPV6	Q9H1D0	765 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	UPF3A	Q9H1J1	476 aa	Known RBP	4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	NUP62CL	Q9H1M0	184 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	ABHD16B	Q9H3Z7	469 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	TRMT13	Q9NUP7	481 aa	Known RBP	4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	CYP39A1	Q9NYL5	469 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	MBD1	Q9UIS9	605 aa	Predicted RBP	4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	MAGEL2	Q9UJ55	1249 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	POLH	Q9Y253	713 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	PCDHGB6	Q9Y5F9	930 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	CHD7	Q9P2D1	2997 aa		4.96	□□□□□ -1.62
MSI2-213	ENST00000581523	TEX51	A0A1B0GUA7	166 aa		4.95	□□□□□ -1.62
MSI2-213	ENST00000581523	MYOCOS	A0A1B0GUC4	107 aa		4.95	□□□□□ -1.62
MSI2-213	ENST00000581523	ZNF503-AS2	A6NEH8	195 aa		4.95	□□□□□ -1.62
MSI2-213	ENST00000581523	ASB14	A6NK59	587 aa		4.95	□□□□□ -1.62
MSI2-213	ENST00000581523		H0Y858	1186 aa		4.95	□□□□□ -1.62
MSI2-213	ENST00000581523	FRS3	O43559	492 aa		4.95	□□□□□ -1.62
MSI2-213	ENST00000581523	AKR1B10	O60218	316 aa		4.95	□□□□□ -1.62
MSI2-213	ENST00000581523	ADAM23	O75077	832 aa		4.95	□□□□□ -1.62
MSI2-213	ENST00000581523	FGA	P02671	866 aa		4.95	□□□□□ -1.62
MSI2-213	ENST00000581523	ICAM1	P05362	532 aa		4.95	□□□□□ -1.62
MSI2-213	ENST00000581523	GAA	P10253	952 aa		4.95	□□□□□ -1.62
MSI2-213	ENST00000581523	HSPD1	P10809	573 aa	Known RBP	4.95	□□□□□ -1.62
MSI2-213	ENST00000581523	PDHB	P11177	359 aa		4.95	□□□□□ -1.62
MSI2-213	ENST00000581523	MYOG	P15173	224 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms