RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 CLUHO75153 1309 aa12.36□□□□□ -0.43
SNORD3C-201ENST00000580533 A0A087X0T9 212 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 SOBPA7XYQ1 873 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 TMCO5BA8MYB1 307 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 E5RJQ4 531 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 TNFRSF10BO14763 440 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 CCL16O15467 120 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 CCP110O43303 1012 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 BEST1O76090 585 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 PAPLNO95428 1278 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 FAM228BP0C875 321 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 RALAP11233 206 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 PFKLP17858 780 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 DDX6P26196 483 aaKnown RBP eCLIP12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 SSTR3P32745 418 aaPredicted RBP12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 RGS7P49802 495 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 GSCP56915 257 aaPredicted RBP12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 GFPT1Q06210 699 aaPredicted RBP12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 IFRD2Q12894 506 aaPredicted RBP12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 ASTE1Q2TB18 679 aaPredicted RBP12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 ATAT1Q5SQI0 421 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 PM20D1Q6GTS8 502 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 OR6B2Q6IFH4 312 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 DNAJC24Q6P3W2 148 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 MMS22LQ6ZRQ5 1243 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 DNAJB7Q7Z6W7 309 aaPredicted RBP12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 MCOLN2Q8IZK6 566 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 TTC9BQ8N6N2 239 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 ZMIZ2Q8NF64 920 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 VN1R2Q8NFZ6 395 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 SMG7Q92540 1137 aaKnown RBP12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 MRPS31Q92665 395 aaKnown RBP12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 NECTIN4Q96NY8 510 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 CPXM1Q96SM3 734 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 PCDHB18PQ96TA0 734 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 C11orf70Q9BRQ4 267 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 CRISPLD1Q9H336 500 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 AVENQ9NQS1 362 aaPredicted RBP12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 OLA1Q9NTK5 396 aaKnown RBP12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 PARVAQ9NVD7 372 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 MTMR10Q9NXD2 777 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 COG5Q9UP83 839 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 FAM50BQ9Y247 325 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 USP3Q9Y6I4 520 aa12.35□□□□□ -0.43
SNORD3C-201ENST00000580533 FAM92AA1XBS5 289 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 SOWAHDA6NJG2 315 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 HHLA1C9JL84 531 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 CAPN9O14815 690 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 HSF2BPO75031 334 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 SOAT2O75908 522 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 LCA5LO95447 670 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 CCDC175P0C221 793 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 TMEM253P0C7T8 217 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 MTHFRP42898 656 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 MAGEA1P43355 309 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 GPR15P49685 360 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 CACNA2D1P54289 1103 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 GPC5P78333 572 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 MRPS5P82675 430 aaKnown RBP12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 SLC6A3Q01959 620 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 COL19A1Q14993 1142 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 CTC1Q2NKJ3 1217 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 PTPN20Q4JDL3 420 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 FAM102AQ5T9C2 384 aaPredicted RBP12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 Q7L0L9 218 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 MON1BQ7L1V2 547 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 BEND5Q7L4P6 421 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 KIAA1328Q86T90 577 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 RHOT2Q8IXI1 618 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 WDTC1Q8N5D0 677 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 C3orf20Q8ND61 904 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 FAM149B1Q96BN6 582 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 ZNF653Q96CK0 615 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 CORO1BQ9BR76 489 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 SELENOOQ9BVL4 669 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 ULBP1Q9BZM6 244 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 TSGA10Q9BZW7 698 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 ADAM7Q9H2U9 754 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 ABCC13Q9NSE7 274 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 RRN3Q9NYV6 651 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 CLIC5Q9NZA1 410 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 IL37Q9NZH6 218 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 PTPRDP23468 1912 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 LAMA3Q16787 3333 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 PLXNA3P51805 1871 aa12.34□□□□□ -0.43
SNORD3C-201ENST00000580533 MTCL1Q9Y4B5 1905 aaKnown RBP12.33□□□□□ -0.44
SNORD3C-201ENST00000580533 TULP2O00295 520 aa12.33□□□□□ -0.44
SNORD3C-201ENST00000580533 ZSCAN12O43309 604 aa12.33□□□□□ -0.44
SNORD3C-201ENST00000580533 RFPL2O75678 378 aa12.33□□□□□ -0.44
SNORD3C-201ENST00000580533 CFHP08603 1231 aa12.33□□□□□ -0.44
SNORD3C-201ENST00000580533 USP17L7P0C7H9 530 aa12.33□□□□□ -0.44
SNORD3C-201ENST00000580533 TUBP50607 506 aa12.33□□□□□ -0.44
SNORD3C-201ENST00000580533 CDR1P51861 262 aa12.33□□□□□ -0.44
SNORD3C-201ENST00000580533 DAOAP59103 153 aa12.33□□□□□ -0.44
SNORD3C-201ENST00000580533 TAF10Q12962 218 aa12.33□□□□□ -0.44
SNORD3C-201ENST00000580533 IFI16Q16666 785 aaKnown RBP12.33□□□□□ -0.44
SNORD3C-201ENST00000580533 PUS10Q3MIT2 529 aaKnown RBP12.33□□□□□ -0.44
SNORD3C-201ENST00000580533 RARS2Q5T160 578 aaKnown RBP12.33□□□□□ -0.44
SNORD3C-201ENST00000580533 SDHAF4Q5VUM1 108 aa12.33□□□□□ -0.44
SNORD3C-201ENST00000580533 BTBD8Q5XKL5 378 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms