RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 TTC8Q8TAM2 541 aa15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 IMPG2Q9BZV3 1241 aa15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 SMYD3Q9H7B4 428 aa15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 FBRSL1Q9HCM7 1045 aaKnown RBP15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 WNT6Q9Y6F9 365 aa15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 ACACBO00763 2458 aa15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 NR2F2P24468 414 aa15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 PSMC2P35998 433 aaKnown RBP15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 ASPAP45381 313 aa15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 LIMK1P53667 647 aa15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 CACNA2D1P54289 1103 aa15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 DLG4P78352 724 aa15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 MRPS21P82921 87 aaKnown RBP15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 GAB4Q2WGN9 574 aa15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 HECTD3Q5T447 861 aa15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 NETO1Q8TDF5 533 aa15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 HNRNPABQ99729 332 aaKnown RBP15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 C2orf42Q9NWW7 574 aa15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 CPQQ9Y646 472 aa15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 PLXND1Q9Y4D7 1925 aa15.37■□□□□ 0.05
SMARCE1-216ENST00000580419 STX10O60499 249 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 ZNF202O95125 648 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 APBB3O95704 486 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 ADH1CP00326 375 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 KRT13P13646 458 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 OPRD1P41143 372 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 SLC5A3P53794 718 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 CDH8P55286 799 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 DMWDQ09019 674 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 RSPO4Q2I0M5 234 aaPredicted RBP15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 ELOA2Q8IYF1 753 aaPredicted RBP15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 SPATA20Q8TB22 786 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 EZH1Q92800 747 aaPredicted RBP15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 FBXO32Q969P5 355 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 ZFRQ96KR1 1074 aaKnown RBP15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 GSDMAQ96QA5 445 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 SDCBP2Q9H190 292 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 LINC00597Q9H2U6 94 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 TMEM8AQ9HCN3 771 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 PARD6AQ9NPB6 346 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 CYLDQ9NQC7 956 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 RMND1Q9NWS8 449 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 PCDHA5Q9Y5H7 936 aa15.36■□□□□ 0.05
SMARCE1-216ENST00000580419 NUP205Q92621 2012 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 CLDN5O00501 218 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 SLC30A4O14863 429 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 HOXC11O43248 304 aaPredicted RBP15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 RPP40O75818 363 aaKnown RBP15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 AP1G2O75843 785 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 HLA-DRAP01903 254 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 CYP17A1P05093 508 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 PSEN1P49768 467 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 NDST1P52848 882 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 ADAM9Q13443 819 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 DHCR24Q15392 516 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 CEP135Q66GS9 1140 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 PKN3Q6P5Z2 889 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 PRR23BQ6ZRT6 265 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 RASSF3Q86WH2 238 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 FAM160A2Q8N612 972 aaPredicted RBP15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 ZMIZ2Q8NF64 920 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 USP33Q8TEY7 942 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 DDX1Q92499 740 aaKnown RBP15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 KCNK16Q96T55 309 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 NT5C1AQ9BXI3 368 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 UBXN6Q9BZV1 441 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 NIF3L1Q9GZT8 377 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 TLR8Q9NR97 1041 aaKnown RBP15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 SEMA4GQ9NTN9 838 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 CDV3Q9UKY7 258 aaKnown RBP15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 SCML2Q9UQR0 700 aa15.35■□□□□ 0.05
SMARCE1-216ENST00000580419 ABCA7Q8IZY2 2146 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 K7EQS6 105 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 AXIN1O15169 862 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 COCHO43405 550 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 CILPO75339 1184 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 EPN2O95208 641 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 ZNF806P0C7X5 589 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 CHRM1P11229 460 aaPredicted RBP15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 PIK3CAP42336 1068 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 TNFRSF4P43489 277 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 DGKEP52429 567 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 DMC1Q14565 340 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 PLA2G2CQ5R387 149 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 KRT39Q6A163 491 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 RHBDF2Q6PJF5 856 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 FOXR2Q6PJQ5 311 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 PRR23CQ6ZRP0 262 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 HTR3DQ70Z44 454 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 CEP68Q76N32 757 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 FILIP1Q7Z7B0 1213 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 ACOT1Q86TX2 421 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 ZC3H3Q8IXZ2 948 aaKnown RBP15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 FAM186BQ8IYM0 893 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 CCDC150Q8NCX0 1101 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 RPLP0P6Q8NHW5 317 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 TIGD1Q96MW7 591 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 PNKPQ96T60 521 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms