RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 ZNF462Q96JM2 2506 aa13.03□□□□□ -0.32
CDK5RAP3-216ENST00000579853 PCDH15Q96QU1 1955 aa13.02□□□□□ -0.32
CDK5RAP3-216ENST00000579853 E2F8A0AVK6 867 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 EIF4E1BA6NMX2 242 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 BMP15O95972 392 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 TMEM191BP0C7N4 346 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GNSP15586 552 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 BDNFP23560 247 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 LONP1P36776 959 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 FAM193AP78312 1265 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 MCM6Q14566 821 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SOWAHAQ2M3V2 549 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SOWAHCQ53LP3 525 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 EMC10Q5UCC4 262 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 TDRD10Q5VZ19 366 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SDE2Q6IQ49 451 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 OSTM1Q86WC4 334 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 FOXJ1Q92949 421 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 MYLPFQ96A32 169 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 ANKRD36BP1Q96IX9 119 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 ACCSQ96QU6 501 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 DUSP9Q99956 384 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 RNF38Q9H0F5 515 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 BLOC1S4Q9NUP1 217 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 CFAP97Q9P2B7 532 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 DEC1Q9P2X7 70 aa13.02□□□□□ -0.33
CDK5RAP3-216ENST00000579853 MYO18BQ8IUG5 2567 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 ANTXRLA6NF34 631 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 TULP1O00294 542 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 ABL1P00519 1130 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 OAS1P00973 400 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 FTH1P19P0C7X4 201 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 MBL2P11226 248 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 HOXB2P14652 356 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GABRG2P18507 467 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GARTP22102 1010 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 NTSR1P30989 418 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 DDIT3P35638 169 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 USP46P62068 366 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 CYP27A1Q02318 531 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 KDSRQ06136 332 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 MESP2Q0VG99 397 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 WDR45BQ5MNZ6 344 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 LY6G5CQ5SRR4 150 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 C19orf48Q6RUI8 117 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 CCNI2Q6ZMN8 369 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 LIMS2Q7Z4I7 341 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 C12orf40Q86WS4 652 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SFTPA1Q8IWL2 248 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PDZD8Q8NEN9 1154 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 CXorf38Q8TB03 319 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 OVCA2Q8WZ82 227 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 C8orf48Q96LL4 319 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SCUBE2Q9NQ36 999 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SMPD4Q9NXE4 827 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 CALCOCO1Q9P1Z2 691 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 STARD13Q9Y3M8 1113 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PCDHB13Q9Y5F0 798 aa13.01□□□□□ -0.33
CDK5RAP3-216ENST00000579853 IGHV1OR15-9A0A0B4J2B8 117 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 KIAA0391O15091 583 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 HOXC11O43248 304 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SH3BP5O60239 455 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 NDUFS2O75306 463 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GJB3O75712 270 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PPP1R37O75864 691 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GAP43P17677 238 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 WARSP23381 471 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 TAF10Q12962 218 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 ALCAMQ13740 583 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SURF1Q15526 300 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 CCDC142Q17RM4 750 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 COL28A1Q2UY09 1125 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PLEKHG6Q3KR16 790 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 L1TD1Q5T7N2 865 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GLRX5Q86SX6 157 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 NAXDQ8IW45 347 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 ETFBKMTQ8IXQ9 262 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 RGL4Q8IZJ4 473 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PHTF2Q8N3S3 785 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 TRIML1Q8N9V2 468 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 TERB1Q8NA31 727 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 MYCBPAPQ8TBZ2 947 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 ZNF419Q96HQ0 510 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 HPDLQ96IR7 371 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 HSPA12BQ96MM6 686 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 STRA6Q9BX79 667 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 MRPL44Q9H9J2 332 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 FSCN3Q9NQT6 498 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 KIAA1522Q9P206 1035 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 DKK4Q9UBT3 224 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SIX4Q9UIU6 781 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 NFE2L3Q9Y4A8 694 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SPTA1P02549 2419 aa13□□□□□ -0.33
CDK5RAP3-216ENST00000579853 F8VP50 259 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 ATP2C2O75185 946 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 TULP3O75386 442 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 RTN3O95197 1032 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 TNNC2P02585 160 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 FAM163BP0C2L3 166 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PSMC1P62191 440 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms