RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 FRMD3A2A2Y4 597 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 HDCP19113 662 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 WEE1P30291 646 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 FMR1Q06787 632 aaKnown RBP eCLIP10.59□□□□□ -0.71
MSI2-209ENST00000579483 ACAP1Q15027 740 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 NDE1Q9NXR1 346 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 ANKRD26Q9UPS8 1709 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 KLRG2A4D1S0 409 aaPredicted RBP10.59□□□□□ -0.71
MSI2-209ENST00000579483 GLRA2P23416 452 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 PTPN3P26045 913 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 RFC2P35250 354 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 SKP1P63208 163 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 CCDC157Q569K6 752 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 FAM46CQ5VWP2 391 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 RGL4Q8IZJ4 473 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 TNS4Q8IZW8 715 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 HSFY1Q96LI6 401 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 CORO1BQ9BR76 489 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 MARCH2Q9P0N8 246 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 BTBD7Q9P203 1132 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 ROBO3Q96MS0 1386 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 FAM95CA0A1B0GW59 222 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 CYTH3O43739 400 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 SUPT3HO75486 399 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 ADH1CP00326 375 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 FGRP09769 529 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 PTPN1P18031 435 aaKnown RBP10.58□□□□□ -0.72
MSI2-209ENST00000579483 COMTP21964 271 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 USP10Q14694 798 aaKnown RBP10.58□□□□□ -0.72
MSI2-209ENST00000579483 MARC1Q5VT66 337 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 E4F1Q66K89 784 aaPredicted RBP10.58□□□□□ -0.72
MSI2-209ENST00000579483 NLRP9Q7RTR0 991 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 ZNF438Q7Z4V0 828 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 RNF135Q8IUD6 432 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 PHACTR4Q8IZ21 702 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 DDX47Q9H0S4 455 aaKnown RBP10.58□□□□□ -0.72
MSI2-209ENST00000579483 C20orf96Q9NUD7 363 aaPredicted RBP10.58□□□□□ -0.72
MSI2-209ENST00000579483 TRMT6Q9UJA5 497 aaKnown RBP10.58□□□□□ -0.72
MSI2-209ENST00000579483 DNPEPQ9ULA0 475 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 FOXN3O00409 490 aaPredicted RBP10.58□□□□□ -0.72
MSI2-209ENST00000579483 RPN2P04844 631 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 DARSP14868 501 aaKnown RBP10.58□□□□□ -0.72
MSI2-209ENST00000579483 PKN3Q6P5Z2 889 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 EPM2AIP1Q7L775 607 aaPredicted RBP10.58□□□□□ -0.72
MSI2-209ENST00000579483 GPR20Q99678 358 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 RNPEPQ9H4A4 650 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 SMPD4Q9NXE4 827 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 TBC1D14Q9P2M4 693 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 NOVA2Q9UNW9 492 aaKnown RBP10.58□□□□□ -0.72
MSI2-209ENST00000579483 ALG6Q9Y672 507 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 VPS26AO75436 327 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 SOAT2O75908 522 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 RHOBTB1O94844 696 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 TOB1P50616 345 aaPredicted RBP10.58□□□□□ -0.72
MSI2-209ENST00000579483 PSMC6P62333 389 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 TSHZ1Q6ZSZ6 1077 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 CEP68Q76N32 757 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.58□□□□□ -0.72
MSI2-209ENST00000579483 PIK3R5Q8WYR1 880 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 PPWD1Q96BP3 646 aaKnown RBP10.58□□□□□ -0.72
MSI2-209ENST00000579483 ZBTB9Q96C00 473 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 ELMO2Q96JJ3 720 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 PRPF18Q99633 342 aaKnown RBP10.58□□□□□ -0.72
MSI2-209ENST00000579483 POPDC2Q9HBU9 364 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 XPO7Q9UIA9 1087 aaKnown RBP10.58□□□□□ -0.72
MSI2-209ENST00000579483 TXNDC9O14530 226 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 CHUKO15111 745 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 LTFP02788 710 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 RRM1P23921 792 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 OLFML2BQ68BL8 750 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 KIAA0319LQ8IZA0 1049 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 BRI3BPQ8WY22 251 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 CLPBQ9H078 707 aa10.58□□□□□ -0.72
MSI2-209ENST00000579483 PMPCBO75439 489 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 USP17L7P0C7H9 530 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 ACAT1P24752 427 aaKnown RBP10.57□□□□□ -0.72
MSI2-209ENST00000579483 THOP1P52888 689 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 GABPB1Q06547 395 aaPredicted RBP10.57□□□□□ -0.72
MSI2-209ENST00000579483 ADIGQ0VDE8 80 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 CAPRIN1Q14444 709 aaKnown RBP10.57□□□□□ -0.72
MSI2-209ENST00000579483 TRMT10CQ7L0Y3 403 aaKnown RBP10.57□□□□□ -0.72
MSI2-209ENST00000579483 NUDCD3Q8IVD9 361 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 CPA6Q8N4T0 437 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 TOP6BLQ8N6T0 577 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 NCLNQ969V3 563 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 MTMR9Q96QG7 549 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 IL25Q9H293 177 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 WDR41Q9HAD4 459 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 TXLNGQ9NUQ3 528 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 CD274Q9NZQ7 290 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 ZDHHC9Q9Y397 364 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 MYO5BQ9ULV0 1848 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 CLTBP09497 229 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 PYGBP11216 843 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 OR1E1P30953 314 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 HALP42357 657 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 HIRAP54198 1017 aaPredicted RBP10.57□□□□□ -0.72
MSI2-209ENST00000579483 SOX10P56693 466 aa10.57□□□□□ -0.72
MSI2-209ENST00000579483 CAMK2GQ13555 558 aaPredicted RBP10.57□□□□□ -0.72
MSI2-209ENST00000579483 RRM2BQ7LG56 351 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms