RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 KRT82Q9NSB4 513 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 KIAA0100Q14667 2235 aaKnown RBP21.21■□□□□ 0.99
SMG8-203ENST00000578922 DAPK3O43293 454 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 LRCH4O75427 683 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 KIAA0754O94854 1291 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 FAM107AO95990 144 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 PDGFRAP16234 1089 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 BCAR1P56945 870 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 MAP3K7CLP57077 242 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 DSC1Q08554 894 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 CDO1Q16878 200 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 SMTNL2Q2TAL5 461 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 RAB6CQ53S08 254 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 TMC3Q7Z5M5 1100 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 PIGZQ86VD9 579 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 COLGALT2Q8IYK4 626 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 NIPA2Q8N8Q9 360 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 DUSP16Q9BY84 665 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 RAB6CQ9H0N0 254 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 PCSK1NQ9UHG2 260 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.2■□□□□ 0.98
SMG8-203ENST00000578922 FAM187AA6NFU0 413 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 TTI1O43156 1089 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 KRT1P04264 644 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 EIF3BP55884 814 aaKnown RBP21.2■□□□□ 0.98
SMG8-203ENST00000578922 SLC6A3Q01959 620 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 C15orf59Q2T9L4 293 aaPredicted RBP21.2■□□□□ 0.98
SMG8-203ENST00000578922 KCNT1Q5JUK3 1230 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 ANKS1BQ7Z6G8 1248 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 MICALL1Q8N3F8 863 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 STK32AQ8WU08 396 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 NDRG1Q92597 394 aaKnown RBP21.2■□□□□ 0.98
SMG8-203ENST00000578922 CFAP57Q96MR6 1250 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 TMEM209Q96SK2 561 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 PLVAPQ9BX97 442 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 NEUROG2Q9H2A3 272 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 CDH9Q9ULB4 789 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 M0QZQ0 153 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 COL6A1P12109 1028 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 NPR3P17342 541 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 GPD1P21695 349 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 SLC8A3P57103 927 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 OVOS1Q6IE37 1185 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 CLEC20AQ6ZU45 233 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 NLRP14Q86W24 1093 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 KATNAL2Q8IYT4 538 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 PRELID2Q8N945 189 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 ZNF473Q8WTR7 871 aaKnown RBP21.2■□□□□ 0.98
SMG8-203ENST00000578922 PAWRQ96IZ0 340 aaKnown RBP21.2■□□□□ 0.98
SMG8-203ENST00000578922 RABEP2Q9H5N1 569 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 KANSL3Q9P2N6 904 aa21.2■□□□□ 0.98
SMG8-203ENST00000578922 C2CD4BA6NLJ0 364 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 XPO1O14980 1071 aaKnown RBP21.19■□□□□ 0.98
SMG8-203ENST00000578922 RARAP10276 462 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 RALAP11233 206 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 PCSK1P29120 753 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 ATP11AP98196 1134 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 FAM35AQ86V20 835 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 FNIP1Q8TF40 1166 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 UBLCP1Q8WVY7 318 aaPredicted RBP21.19■□□□□ 0.98
SMG8-203ENST00000578922 APBB2Q92870 758 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 SUSD3Q96L08 255 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 CASD1Q96PB1 797 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 CCT8L2Q96SF2 557 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 TMEM39AQ9NV64 488 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.19■□□□□ 0.98
SMG8-203ENST00000578922 AP1G2O75843 785 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 UPP2O95045 317 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 FAM200BP0CF97 657 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 IL1R2P27930 398 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 CACNA2D1P54289 1103 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 DRG2P55039 364 aaKnown RBP21.19■□□□□ 0.98
SMG8-203ENST00000578922 ADIGQ0VDE8 80 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 DHX34Q14147 1143 aaKnown RBP21.19■□□□□ 0.98
SMG8-203ENST00000578922 OR10T2Q8NGX3 314 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 MYCBPAPQ8TBZ2 947 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 KHSRPQ92945 711 aaKnown RBP eCLIP21.19■□□□□ 0.98
SMG8-203ENST00000578922 TOX2Q96NM4 488 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 KCNK16Q96T55 309 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 ELAC1Q9H777 363 aaKnown RBP21.19■□□□□ 0.98
SMG8-203ENST00000578922 TMEM30AQ9NV96 361 aa21.19■□□□□ 0.98
SMG8-203ENST00000578922 PPFIA2O75334 1257 aa21.18■□□□□ 0.98
SMG8-203ENST00000578922 CYP11A1P05108 521 aa21.18■□□□□ 0.98
SMG8-203ENST00000578922 ZNF143P52747 638 aaPredicted RBP21.18■□□□□ 0.98
SMG8-203ENST00000578922 SNX16P57768 344 aa21.18■□□□□ 0.98
SMG8-203ENST00000578922 PLCB3Q01970 1234 aa21.18■□□□□ 0.98
SMG8-203ENST00000578922 ODF2Q5BJF6 829 aa21.18■□□□□ 0.98
SMG8-203ENST00000578922 KAZNQ674X7 775 aa21.18■□□□□ 0.98
SMG8-203ENST00000578922 RAPGEF5Q92565 580 aa21.18■□□□□ 0.98
SMG8-203ENST00000578922 MYLPFQ96A32 169 aa21.18■□□□□ 0.98
SMG8-203ENST00000578922 MAGOHBQ96A72 148 aaKnown RBP21.18■□□□□ 0.98
SMG8-203ENST00000578922 NRDE2Q9H7Z3 1164 aa21.18■□□□□ 0.98
SMG8-203ENST00000578922 TMLHEQ9NVH6 421 aa21.18■□□□□ 0.98
SMG8-203ENST00000578922 SLC12A6Q9UHW9 1150 aa21.18■□□□□ 0.98
SMG8-203ENST00000578922 RNF8O76064 485 aa21.17■□□□□ 0.98
SMG8-203ENST00000578922 MIPP30301 263 aa21.17■□□□□ 0.98
SMG8-203ENST00000578922 PBX3P40426 434 aa21.17■□□□□ 0.98
SMG8-203ENST00000578922 GJA8P48165 433 aa21.17■□□□□ 0.98
SMG8-203ENST00000578922 NDUFV1P49821 464 aa21.17■□□□□ 0.98
SMG8-203ENST00000578922 SLC25A11Q02978 314 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms