RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 LCLAT1Q6UWP7 414 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 PRUNE1Q86TP1 453 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 RNF168Q8IYW5 571 aaPredicted RBP10.09□□□□□ -0.79
BPTF-211ENST00000578307 C2orf69Q8N8R5 385 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 LSM14AQ8ND56 463 aaKnown RBP10.09□□□□□ -0.79
BPTF-211ENST00000578307 NPLOC4Q8TAT6 608 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 UBA3Q8TBC4 463 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 RBM15Q96T37 977 aaKnown RBP eCLIP10.09□□□□□ -0.79
BPTF-211ENST00000578307 YIPF2Q9BWQ6 316 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 FAM49AQ9H0Q0 323 aaPredicted RBP10.09□□□□□ -0.79
BPTF-211ENST00000578307 TSPAN16Q9UKR8 245 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 ZNF510Q9Y2H8 683 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 NRCAMQ92823 1304 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 CFAP73A6NFT4 308 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 C3orf70A6NLC5 250 aaPredicted RBP10.09□□□□□ -0.79
BPTF-211ENST00000578307 SGK1O00141 431 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 CST8O60676 142 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 ATP6V1G1O75348 118 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 TCEA3O75764 348 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 GPD1P21695 349 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 PAX3P23760 479 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 IL1R2P27930 398 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 ALDH3A1P30838 453 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 DYNLT1P63172 113 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 TMEM62Q0P6H9 643 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 PCBP1Q15365 356 aaKnown RBP eCLIP10.09□□□□□ -0.79
BPTF-211ENST00000578307 SPRYD7Q5W111 196 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 NOTUMQ6P988 496 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 ARFGAP1Q8N6T3 406 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 SMYD1Q8NB12 490 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 KCTD6Q8NC69 237 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 PWWP2AQ96N64 755 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 ADAMTS10Q9H324 1103 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 PCDH9Q9HC56 1237 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 INTS9Q9NV88 658 aaKnown RBP10.09□□□□□ -0.79
BPTF-211ENST00000578307 SNTG2Q9NY99 539 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 CIDEBQ9UHD4 219 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 PCSK1NQ9UHG2 260 aa10.09□□□□□ -0.79
BPTF-211ENST00000578307 SCN1AP35498 2009 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 DYNC1LI2O43237 492 aaPredicted RBP10.08□□□□□ -0.8
BPTF-211ENST00000578307 IFNB1P01574 187 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 ZSCAN5DPP0CG00 497 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 ALADP13716 330 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 MIPP30301 263 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 MAGEA4P43358 317 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 CTCFP49711 727 aaPredicted RBP10.08□□□□□ -0.8
BPTF-211ENST00000578307 ZNF143P52747 638 aaPredicted RBP10.08□□□□□ -0.8
BPTF-211ENST00000578307 OTUD4Q01804 1114 aaKnown RBP10.08□□□□□ -0.8
BPTF-211ENST00000578307 STAT4Q14765 748 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 MORF4L2Q15014 288 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 OR6B2Q6IFH4 312 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 BBS12Q6ZW61 710 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 CPLX4Q7Z7G2 160 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 PCGF5Q86SE9 256 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 EXOC3L1Q86VI1 746 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 KIRREL3Q8IZU9 778 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 GLIS1Q8NBF1 620 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 BEST2Q8NFU1 509 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 SLC35B2Q8TB61 432 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 ARHGEF2Q92974 986 aaKnown RBP10.08□□□□□ -0.8
BPTF-211ENST00000578307 CHMP6Q96FZ7 201 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 SNX27Q96L92 541 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 C9orf72Q96LT7 481 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 TTC25Q96NG3 672 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 TRAPPC9Q96Q05 1148 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 TMEM121Q9BTD3 319 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 ADAM7Q9H2U9 754 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 USP18Q9UMW8 372 aa10.08□□□□□ -0.8
BPTF-211ENST00000578307 PDCD11Q14690 1871 aaKnown RBP10.08□□□□□ -0.8
BPTF-211ENST00000578307 SMIM35A0A1B0GVV1 85 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 A6NJR5 290 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 ADCY6O43306 1168 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 ANP32DO95626 131 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 TRUB2O95900 331 aaKnown RBP10.07□□□□□ -0.8
BPTF-211ENST00000578307 ABHD2P08910 425 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 SMIM10L2AP0DMW4 78 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 SMIM10L2BP0DMW5 78 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 CYP2C9P11712 490 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 ETS1P14921 441 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 PCK1P35558 622 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 TAZQ16635 292 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 TSNAXIP1Q2TAA8 658 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 GOLGA7BQ2TAP0 167 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 KBTBD12Q3ZCT8 623 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 PABPC1LQ4VXU2 614 aaKnown RBP10.07□□□□□ -0.8
BPTF-211ENST00000578307 RFX6Q8HWS3 928 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 ACTL9Q8TC94 416 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 ATXN2LQ8WWM7 1075 aaKnown RBP10.07□□□□□ -0.8
BPTF-211ENST00000578307 HSPH1Q92598 858 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 CFAP57Q96MR6 1250 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 OSMRQ99650 979 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 PTPN18Q99952 460 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 ARPC5LQ9BPX5 153 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 CNPY3Q9BT09 278 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 SAYSD1Q9NPB0 183 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 SPATA7Q9P0W8 599 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 SNX9Q9Y5X1 595 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 C5orf60A6NFR6 353 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 E5RJQ4 531 aa10.07□□□□□ -0.8
BPTF-211ENST00000578307 CDH16O75309 829 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms