RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 ASB2Q96Q27 587 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 RPAP3Q9H6T3 665 aaPredicted RBP11.1□□□□□ -0.63
SEC22B-201ENST00000578049 COMMD3-BMI1R4GMX3 469 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 UNC5CO95185 931 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 GP5P40197 560 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 RGS7P49802 495 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 MYL6P60660 151 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 DDR1Q08345 913 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 DCAF4L1Q3SXM0 396 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 SPATA2LQ8IUW3 424 aaPredicted RBP11.09□□□□□ -0.63
SEC22B-201ENST00000578049 DCP1BQ8IZD4 617 aaKnown RBP11.09□□□□□ -0.63
SEC22B-201ENST00000578049 ATAD3AQ9NVI7 634 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 UBQLN1Q9UMX0 589 aaKnown RBP11.09□□□□□ -0.63
SEC22B-201ENST00000578049 VWA5AO00534 786 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 ROR2Q01974 943 aaKnown RBP11.09□□□□□ -0.63
SEC22B-201ENST00000578049 BAATQ14032 418 aaPredicted RBP11.09□□□□□ -0.63
SEC22B-201ENST00000578049 THEMIS2Q5TEJ8 643 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 B4GALNT2Q8NHY0 566 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 ZKSCAN4Q969J2 545 aaPredicted RBP11.09□□□□□ -0.63
SEC22B-201ENST00000578049 SH3KBP1Q96B97 665 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 C19orf60Q96EN9 201 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 MMP19Q99542 508 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 OLFM1Q99784 485 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 POLE3Q9NRF9 147 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 TRIM24O15164 1050 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 FAM200BP0CF97 657 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 ME2P23368 584 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 RRM1P23921 792 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 TTC27Q6P3X3 843 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 CCDC33Q8N5R6 958 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 MAGEC3Q8TD91 643 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 ATG4AQ8WYN0 398 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 TMEM143Q96AN5 459 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 HPDLQ96IR7 371 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 STN1Q9H668 368 aaKnown RBP11.09□□□□□ -0.63
SEC22B-201ENST00000578049 PTPRMP28827 1452 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 BNIP3LO60238 219 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 TRIM13O60858 407 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 AKAP3O75969 853 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 FBXO21O94952 628 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 SGPL1O95470 568 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 PDIA6Q15084 440 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 BBS2Q9BXC9 721 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 GIMAP4Q9NUV9 329 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 F5H423 210 aaPredicted RBP11.09□□□□□ -0.63
SEC22B-201ENST00000578049 CNOT3O75175 753 aaKnown RBP11.09□□□□□ -0.63
SEC22B-201ENST00000578049 DLGAP3O95886 979 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 ACTL9Q8TC94 416 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 SNRNP27Q8WVK2 155 aaKnown RBP11.09□□□□□ -0.63
SEC22B-201ENST00000578049 MIEF2Q96C03 454 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 PRKD2Q9BZL6 878 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 MYO3AQ8NEV4 1616 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 SLC37A4O43826 429 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 WFS1O76024 890 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 SUPT7LO94864 414 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 CAMTA2O94983 1202 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 SLC25A27O95847 323 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 TXNP10599 105 aaKnown RBP11.09□□□□□ -0.63
SEC22B-201ENST00000578049 HNRNPH3P31942 346 aaKnown RBP11.09□□□□□ -0.63
SEC22B-201ENST00000578049 ALDH5A1P51649 535 aaPredicted RBP11.09□□□□□ -0.63
SEC22B-201ENST00000578049 MPP3Q13368 585 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 SAMD4BQ5PRF9 694 aaKnown RBP11.09□□□□□ -0.63
SEC22B-201ENST00000578049 PKN3Q6P5Z2 889 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 ABRAQ8N0Z2 381 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 ZCCHC9Q8N567 271 aaKnown RBP11.09□□□□□ -0.63
SEC22B-201ENST00000578049 FAM210AQ96ND0 272 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 ADAM30Q9UKF2 790 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 AFF2P51816 1311 aa11.09□□□□□ -0.63
SEC22B-201ENST00000578049 NRXN1Q9ULB1 1477 aa11.08□□□□□ -0.63
SEC22B-201ENST00000578049 ZBTB39O15060 712 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 UBDO15205 165 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 MYL3P08590 195 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 RIPK1Q13546 671 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 PTRHD1Q6GMV3 140 aaKnown RBP11.08□□□□□ -0.64
SEC22B-201ENST00000578049 GJB7Q6PEY0 223 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 DEFB107AQ8IZN7 70 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 TRPC4APQ8TEL6 797 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 C9orf16Q9BUW7 83 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 RUSC1Q9BVN2 902 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 KATNAL1Q9BW62 490 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 RIOX1Q9H6W3 641 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 RRN3Q9NYV6 651 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 ANKRD6Q9Y2G4 727 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 SPDYE5A6NIY4 337 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 VPS4BO75351 444 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 VPS26AO75436 327 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 NAA20P61599 178 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 KIZQ2M2Z5 673 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 SPDYE7PQ495Y7 208 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 IPMKQ8NFU5 416 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 CEP44Q9C0F1 390 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 KLHL25Q9H0H3 589 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 SELENONQ9NZV5 590 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 POLG2Q9UHN1 485 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 SESN1Q9Y6P5 492 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 DGKIO75912 1065 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 RHOBTB1O94844 696 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 CYP2C9P11712 490 aa11.08□□□□□ -0.64
SEC22B-201ENST00000578049 MSLNQ13421 630 aaPredicted RBP11.08□□□□□ -0.64
SEC22B-201ENST00000578049 PABPC5Q96DU9 382 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms