RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 ANTXRLA6NF34 631 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 F8VP50 259 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 HOXC11O43248 304 aaPredicted RBP14.22□□□□□ -0.13
COPS3-214ENST00000577246 HCRTO43612 131 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 RTN3O95197 1032 aaPredicted RBP14.22□□□□□ -0.13
COPS3-214ENST00000577246 FAM163BP0C2L3 166 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 CHRM1P11229 460 aaPredicted RBP14.22□□□□□ -0.13
COPS3-214ENST00000577246 HOXB2P14652 356 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 GNSP15586 552 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 LMO2P25791 158 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 NTSR1P30989 418 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 KCNA1Q09470 495 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 TAF10Q12962 218 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 TRIP6Q15654 476 aaKnown RBP14.22□□□□□ -0.13
COPS3-214ENST00000577246 LY6G5CQ5SRR4 150 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 STXBP4Q6ZWJ1 553 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 SV2BQ7L1I2 683 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 HS2ST1Q7LGA3 356 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 BRAPQ7Z569 592 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 SFTPA1Q8IWL2 248 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 GPD1LQ8N335 351 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 DUSP9Q99956 384 aaKnown RBP14.22□□□□□ -0.13
COPS3-214ENST00000577246 ZDHHC5Q9C0B5 715 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 INTS13Q9NVM9 706 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 SH3BP1Q9Y3L3 701 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 GPSM3Q9Y4H4 160 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 PKD1L2Q7Z442 2459 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 ZFYVE26Q68DK2 2539 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 ABCA7Q8IZY2 2146 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 MYO16Q9Y6X6 1858 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 GOLGA8IPA6NC78 632 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 ZNF233A6NK53 670 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 GOLGA8JA6NMD2 632 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 PRPF6O94906 941 aaKnown RBP14.21□□□□□ -0.13
COPS3-214ENST00000577246 PDGFRBP09619 1106 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 CD59P13987 128 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 GABRG2P18507 467 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 YWHAQP27348 245 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 GJB2P29033 226 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 GNL1P36915 607 aaPredicted RBP14.21□□□□□ -0.13
COPS3-214ENST00000577246 MESP2Q0VG99 397 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 SCAPQ12770 1279 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 MDH1BQ5I0G3 518 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 C10orf76Q5T2E6 689 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 ETFBKMTQ8IXQ9 262 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 PHTF2Q8N3S3 785 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 TERB1Q8NA31 727 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 ADAMTS14Q8WXS8 1223 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 FOXJ1Q92949 421 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 CBWD1Q9BRT8 395 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 CCDC86Q9H6F5 360 aaKnown RBP14.21□□□□□ -0.13
COPS3-214ENST00000577246 KIAA1586Q9HCI6 787 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 FSCN3Q9NQT6 498 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 TBC1D7Q9P0N9 293 aa14.21□□□□□ -0.13
COPS3-214ENST00000577246 APOBEC2Q9Y235 224 aaKnown RBP14.21□□□□□ -0.13
COPS3-214ENST00000577246 ATP8B3O60423 1300 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 IGHV1OR15-9A0A0B4J2B8 117 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 SCAMP3O14828 347 aaKnown RBP14.2□□□□□ -0.14
COPS3-214ENST00000577246 NDUFS2O75306 463 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 TULP3O75386 442 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 TACC1O75410 805 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 IDEP14735 1019 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 TUBP50607 506 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 ANO4Q32M45 955 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 PLEKHG6Q3KR16 790 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 WDR45BQ5MNZ6 344 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 HECTD3Q5T447 861 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 RRAGBQ5VZM2 374 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 WDR49Q8IV35 697 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 NAXDQ8IW45 347 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 RGL4Q8IZJ4 473 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 NUP93Q8N1F7 819 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 TRIML1Q8N9V2 468 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 ZSWIM2Q8NEG5 633 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 FBXO32Q969P5 355 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 HSPA12BQ96MM6 686 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 NACA2Q9H009 215 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 PCIF1Q9H4Z3 704 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 SPHK2Q9NRA0 654 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 STARD13Q9Y3M8 1113 aa14.2□□□□□ -0.14
COPS3-214ENST00000577246 COCHO43405 550 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 SH3BP5O60239 455 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 CAPNS1P04632 268 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 FTH1P19P0C7X4 201 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 TNNC1P63316 161 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 FAM193AP78312 1265 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 GRIN1Q05586 938 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 IFRD2Q12894 506 aaPredicted RBP14.19□□□□□ -0.14
COPS3-214ENST00000577246 SF3A1Q15459 793 aaKnown RBP14.19□□□□□ -0.14
COPS3-214ENST00000577246 GRAMD4Q6IC98 578 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 PDZD3Q86UT5 571 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 CHPFQ8IZ52 775 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 DEFB119Q8N690 84 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 NAT16Q8N8M0 369 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 OR6B3Q8NGW1 331 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 SCFD1Q8WVM8 642 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 XPO6Q96QU8 1125 aaKnown RBP14.19□□□□□ -0.14
COPS3-214ENST00000577246 ZDHHC4Q9NPG8 344 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 CYP8B1Q9UNU6 501 aa14.19□□□□□ -0.14
COPS3-214ENST00000577246 HELZP42694 1942 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms