RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 PMS1P54277 932 aaKnown RBP16.4■□□□□ 0.22
SF3B3-215ENST00000577085 SLC8A3P57103 927 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 CETN1Q12798 172 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 FILIP1Q7Z7B0 1213 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 ZBTB44Q8NCP5 570 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 CCDC26Q8TAB7 109 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 RUBCNQ92622 972 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 SEMA4DQ92854 862 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 CD101Q93033 1021 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 TWNKQ96RR1 684 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 LINC00597Q9H2U6 94 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 CSNK1G1Q9HCP0 422 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 CISHQ9NSE2 258 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 TBC1D14Q9P2M4 693 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 SH3BP1Q9Y3L3 701 aa16.4■□□□□ 0.22
SF3B3-215ENST00000577085 GREB1Q4ZG55 1949 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 BIN1O00499 593 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 COCHO43405 550 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 GADD45BO75293 160 aaPredicted RBP16.39■□□□□ 0.21
SF3B3-215ENST00000577085 BEST1O76090 585 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 OLFM2O95897 454 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 ACO1P21399 889 aaKnown RBP16.39■□□□□ 0.21
SF3B3-215ENST00000577085 TUBP50607 506 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 YWHAEP62258 255 aaKnown RBP16.39■□□□□ 0.21
SF3B3-215ENST00000577085 GOLGA8FQ08AF8 430 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 GOLGA8DPQ0D2H9 430 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 GAS6Q14393 721 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 FBXO43Q4G163 708 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 CBWD6Q4V339 395 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 CBWD3Q5JTY5 395 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 CBWD5Q5RIA9 395 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 HEATR6Q6AI08 1181 aaKnown RBP16.39■□□□□ 0.21
SF3B3-215ENST00000577085 FSTL4Q6MZW2 842 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 CLEC20AQ6ZU45 233 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 KIAA1958Q8N8K9 716 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 NELFBQ8WX92 580 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 CHFRQ96EP1 664 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 TMEM176AQ96HP8 235 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 CEP63Q96MT8 703 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 SLC8A2Q9UPR5 921 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 CTNND2Q9UQB3 1225 aa16.39■□□□□ 0.21
SF3B3-215ENST00000577085 SCAMP3O14828 347 aaKnown RBP16.38■□□□□ 0.21
SF3B3-215ENST00000577085 RNF40O75150 1001 aa16.38■□□□□ 0.21
SF3B3-215ENST00000577085 ADH1CP00326 375 aa16.38■□□□□ 0.21
SF3B3-215ENST00000577085 EGFP01133 1207 aa16.38■□□□□ 0.21
SF3B3-215ENST00000577085 ZXDBP98169 803 aa16.38■□□□□ 0.21
SF3B3-215ENST00000577085 SNX30Q5VWJ9 437 aa16.38■□□□□ 0.21
SF3B3-215ENST00000577085 PRR23BQ6ZRT6 265 aa16.38■□□□□ 0.21
SF3B3-215ENST00000577085 TADA2BQ86TJ2 420 aa16.38■□□□□ 0.21
SF3B3-215ENST00000577085 ZC3H3Q8IXZ2 948 aaKnown RBP16.38■□□□□ 0.21
SF3B3-215ENST00000577085 ZMIZ2Q8NF64 920 aa16.38■□□□□ 0.21
SF3B3-215ENST00000577085 NELL1Q92832 810 aa16.38■□□□□ 0.21
SF3B3-215ENST00000577085 FAM124BQ9H5Z6 455 aaPredicted RBP16.38■□□□□ 0.21
SF3B3-215ENST00000577085 CCSER2Q9H7U1 834 aa16.38■□□□□ 0.21
SF3B3-215ENST00000577085 PNPLA8Q9NP80 782 aa16.38■□□□□ 0.21
SF3B3-215ENST00000577085 IL37Q9NZH6 218 aa16.38■□□□□ 0.21
SF3B3-215ENST00000577085 CHMP5Q9NZZ3 219 aa16.38■□□□□ 0.21
SF3B3-215ENST00000577085 SMG5Q9UPR3 1016 aaKnown RBP16.38■□□□□ 0.21
SF3B3-215ENST00000577085 ZFHX2Q9C0A1 2572 aaPredicted RBP16.37■□□□□ 0.21
SF3B3-215ENST00000577085 KIF26AQ9ULI4 1882 aaPredicted RBP16.37■□□□□ 0.21
SF3B3-215ENST00000577085 E2F8A0AVK6 867 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 CYP26A1O43174 497 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 TLR5O60602 858 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 LILRB5O75023 590 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 PAPSS2O95340 614 aaPredicted RBP16.37■□□□□ 0.21
SF3B3-215ENST00000577085 IRF1P10914 325 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 ANP32AP39687 249 aaKnown RBP16.37■□□□□ 0.21
SF3B3-215ENST00000577085 MCCD1P59942 119 aaPredicted RBP16.37■□□□□ 0.21
SF3B3-215ENST00000577085 UBE2HP62256 183 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 PPP1R26Q5T8A7 1209 aaPredicted RBP16.37■□□□□ 0.21
SF3B3-215ENST00000577085 LONP2Q86WA8 852 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 WHAMMQ8TF30 809 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 TATDN2Q93075 761 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 ARID3AQ99856 593 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 DUSP16Q9BY84 665 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 EPC1Q9H2F5 836 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 GMEB2Q9UKD1 530 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 SCML2Q9UQR0 700 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 ANAPC1Q9H1A4 1944 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 CACNA1IQ9P0X4 2223 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 DMDP11532 3685 aa16.37■□□□□ 0.21
SF3B3-215ENST00000577085 FAM92AA1XBS5 289 aa16.36■□□□□ 0.21
SF3B3-215ENST00000577085 CHURC1-FNTBB4DL54 471 aa16.36■□□□□ 0.21
SF3B3-215ENST00000577085 FGFR1OPO95684 399 aaKnown RBP16.36■□□□□ 0.21
SF3B3-215ENST00000577085 TDGF1P13385 188 aa16.36■□□□□ 0.21
SF3B3-215ENST00000577085 CD44P16070 742 aaKnown RBP16.36■□□□□ 0.21
SF3B3-215ENST00000577085 TBXAS1P24557 533 aaPredicted RBP16.36■□□□□ 0.21
SF3B3-215ENST00000577085 CNR2P34972 360 aa16.36■□□□□ 0.21
SF3B3-215ENST00000577085 ATP5C1P36542 298 aaKnown RBP16.36■□□□□ 0.21
SF3B3-215ENST00000577085 FMO5P49326 533 aa16.36■□□□□ 0.21
SF3B3-215ENST00000577085 FNTBP49356 437 aa16.36■□□□□ 0.21
SF3B3-215ENST00000577085 LRMPQ12912 555 aa16.36■□□□□ 0.21
SF3B3-215ENST00000577085 PAK1Q13153 545 aa16.36■□□□□ 0.21
SF3B3-215ENST00000577085 CUL2Q13617 745 aa16.36■□□□□ 0.21
SF3B3-215ENST00000577085 MORC3Q14149 939 aa16.36■□□□□ 0.21
SF3B3-215ENST00000577085 BTBD8Q5XKL5 378 aa16.36■□□□□ 0.21
SF3B3-215ENST00000577085 KIAA2013Q8IYS2 634 aa16.36■□□□□ 0.21
SF3B3-215ENST00000577085 ADGRG2Q8IZP9 1017 aa16.36■□□□□ 0.21
SF3B3-215ENST00000577085 SUMF1Q8NBK3 374 aa16.36■□□□□ 0.21
SF3B3-215ENST00000577085 SLC35C1Q96A29 364 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms