RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 CEP295NLQ96MC4 621 aa12.6□□□□□ -0.39
LITAF-219ENST00000576334 SLITRK1Q96PX8 696 aa12.6□□□□□ -0.39
LITAF-219ENST00000576334 P2RY13Q9BPV8 354 aa12.6□□□□□ -0.39
LITAF-219ENST00000576334 NIF3L1Q9GZT8 377 aa12.6□□□□□ -0.39
LITAF-219ENST00000576334 SEMA4AQ9H3S1 761 aa12.6□□□□□ -0.39
LITAF-219ENST00000576334 TMEM8AQ9HCN3 771 aa12.6□□□□□ -0.39
LITAF-219ENST00000576334 OSER1Q9NX31 292 aa12.6□□□□□ -0.39
LITAF-219ENST00000576334 NUDT5Q9UKK9 219 aa12.6□□□□□ -0.39
LITAF-219ENST00000576334 MAN1B1Q9UKM7 699 aa12.6□□□□□ -0.39
LITAF-219ENST00000576334 SMG5Q9UPR3 1016 aaKnown RBP12.6□□□□□ -0.39
LITAF-219ENST00000576334 KIAA1549LQ6ZVL6 1849 aa12.6□□□□□ -0.39
LITAF-219ENST00000576334 BIN1O00499 593 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 CETN3O15182 167 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 TBX18O95935 607 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 CYP17A1P05093 508 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 OPRD1P41143 372 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 SLC6A11P48066 632 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 MXI1P50539 228 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 INCA1Q0VD86 236 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 GRSF1Q12849 480 aaKnown RBP eCLIP12.59□□□□□ -0.39
LITAF-219ENST00000576334 PPP1R26Q5T8A7 1209 aaPredicted RBP12.59□□□□□ -0.39
LITAF-219ENST00000576334 TCERG1LQ5VWI1 586 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 KRT39Q6A163 491 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 C1orf228Q6PIY5 440 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 UNC93AQ86WB7 457 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 C12orf40Q86WS4 652 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 RUBCNQ92622 972 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 ATP2A3Q93084 1043 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 CYFIP2Q96F07 1278 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 GSDMAQ96QA5 445 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 EPC1Q9H2F5 836 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 CSNK1G1Q9HCP0 422 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 ZDHHC4Q9NPG8 344 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 RMND1Q9NWS8 449 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 IL37Q9NZH6 218 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 EML5Q05BV3 1969 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 ATP8B3O60423 1300 aa12.59□□□□□ -0.39
LITAF-219ENST00000576334 LAMA1P25391 3075 aa12.58□□□□□ -0.39
LITAF-219ENST00000576334 MDM4O15151 490 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 CYP26A1O43174 497 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 CILPO75339 1184 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 RTN3O95197 1032 aaPredicted RBP12.58□□□□□ -0.4
LITAF-219ENST00000576334 ZDHHC11BP0C7U3 371 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 IRF1P10914 325 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 EPB41P11171 864 aaKnown RBP12.58□□□□□ -0.4
LITAF-219ENST00000576334 TCF3P15923 654 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 SEC13P55735 322 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 MCCD1P59942 119 aaPredicted RBP12.58□□□□□ -0.4
LITAF-219ENST00000576334 LRMPQ12912 555 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 KLHL10Q6JEL2 608 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 RHBDF2Q6PJF5 856 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 PRR23BQ6ZRT6 265 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 ZC3H3Q8IXZ2 948 aaKnown RBP12.58□□□□□ -0.4
LITAF-219ENST00000576334 ADGRG2Q8IZP9 1017 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 RPLP0P6Q8NHW5 317 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 CD101Q93033 1021 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 HNRNPABQ99729 332 aaKnown RBP12.58□□□□□ -0.4
LITAF-219ENST00000576334 DUSP9Q99956 384 aaKnown RBP12.58□□□□□ -0.4
LITAF-219ENST00000576334 NT5C1AQ9BXI3 368 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 IMPG2Q9BZV3 1241 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 NMUR1Q9HB89 426 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 RAB20Q9NX57 234 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 NCDNQ9UBB6 729 aa12.58□□□□□ -0.4
LITAF-219ENST00000576334 SDK1Q7Z5N4 2213 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 FAM92AA1XBS5 289 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 SMC2O95347 1197 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 CALCAP01258 141 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 FAM200BP0CF97 657 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 ACO1P21399 889 aaKnown RBP12.57□□□□□ -0.4
LITAF-219ENST00000576334 PPP3CCP48454 512 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 RAD23BP54727 409 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 DHCR24Q15392 516 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 COBLL1Q53SF7 1204 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 HECTD3Q5T447 861 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 BBS7Q8IWZ6 715 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 SLC4A11Q8NBS3 891 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 FBXL13Q8NEE6 735 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 RMDN1Q96DB5 314 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 HEXIM2Q96MH2 286 aaKnown RBP12.57□□□□□ -0.4
LITAF-219ENST00000576334 TIGD1Q96MW7 591 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 HHIPQ96QV1 700 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 IER2Q9BTL4 223 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 CYP3A43Q9HB55 503 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 PARD6AQ9NPB6 346 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 CISHQ9NSE2 258 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 EHD2Q9NZN4 543 aa12.57□□□□□ -0.4
LITAF-219ENST00000576334 A0A1W2PQH9 124 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 PPP1R3GB7ZBB8 358 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 K7EQS6 105 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 TULP2O00295 520 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 TRIM24O15164 1050 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 PAPSS2O95340 614 aaPredicted RBP12.56□□□□□ -0.4
LITAF-219ENST00000576334 NFATC1O95644 943 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 DRD1P21728 446 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 TGM1P22735 817 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 GTF2H1P32780 548 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 PDE6CP51160 858 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 NRLP54845 237 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 STX17P56962 302 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 FKBP3Q00688 224 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms