RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ZNF77Q15935 545 aa16.1■□□□□ 0.17
SMG6-220ENST00000576218 GBP6Q6ZN66 633 aa16.1■□□□□ 0.17
SMG6-220ENST00000576218 RALGPS2Q86X27 583 aaPredicted RBP16.1■□□□□ 0.17
SMG6-220ENST00000576218 ATP2A3Q93084 1043 aa16.1■□□□□ 0.17
SMG6-220ENST00000576218 CRACR2AQ9BSW2 395 aa16.1■□□□□ 0.17
SMG6-220ENST00000576218 OSBPL6Q9BZF3 934 aa16.1■□□□□ 0.17
SMG6-220ENST00000576218 TSPAN16Q9UKR8 245 aa16.1■□□□□ 0.17
SMG6-220ENST00000576218 SH3BP1Q9Y3L3 701 aa16.1■□□□□ 0.17
SMG6-220ENST00000576218 MTF2Q9Y483 593 aaPredicted RBP16.1■□□□□ 0.17
SMG6-220ENST00000576218 WNT6Q9Y6F9 365 aa16.1■□□□□ 0.17
SMG6-220ENST00000576218 GREB1Q4ZG55 1949 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 DENND4CQ5VZ89 1909 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 COL4A3Q01955 1670 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 ARNTLO00327 626 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 CYP26A1O43174 497 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 OAS1P00973 400 aaKnown RBP16.09■□□□□ 0.17
SMG6-220ENST00000576218 CTHP32929 405 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 USP8P40818 1118 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 MFAP3P55082 362 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 SLC7A9P82251 487 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 NHLH1Q02575 133 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 GCNT1Q02742 428 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 GOLGA8FQ08AF8 430 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 GOLGA8DPQ0D2H9 430 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 NR1H3Q13133 447 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 LRRC32Q14392 662 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 ANGPT1Q15389 498 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 MAN2A1Q16706 1144 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 CCDC183Q5T5S1 534 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 ARHGAP17Q68EM7 881 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 GPRIN1Q7Z2K8 1008 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 TADA2BQ86TJ2 420 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 ARHGEF19Q8IW93 802 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 RBBP8NLQ8NC74 664 aaPredicted RBP16.09■□□□□ 0.17
SMG6-220ENST00000576218 OSCP1Q8WVF1 389 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 KAT5Q92993 513 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 FAM81BQ96LP2 452 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 CCSER2Q9H7U1 834 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 LRRC4Q9HBW1 653 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 UBE2TQ9NPD8 197 aaPredicted RBP16.09■□□□□ 0.17
SMG6-220ENST00000576218 CFAP97Q9P2B7 532 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 NAGPAQ9UK23 515 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 KIAA1257Q9ULG3 409 aa16.09■□□□□ 0.17
SMG6-220ENST00000576218 MIA3Q5JRA6 1907 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 SLC9A3R1O14745 358 aaPredicted RBP16.08■□□□□ 0.16
SMG6-220ENST00000576218 COCHO43405 550 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 LAMTOR5O43504 91 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 TLR5O60602 858 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 NFATC1O95644 943 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 PAEPP09466 180 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 IRF1P10914 325 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 RALAP11233 206 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 ARSAP15289 507 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 TUBP50607 506 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 MLLT6P55198 1093 aaPredicted RBP16.08■□□□□ 0.16
SMG6-220ENST00000576218 BST2Q10589 180 aaKnown RBP16.08■□□□□ 0.16
SMG6-220ENST00000576218 TCF15Q12870 199 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 PON2Q15165 354 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 STX1AQ16623 288 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 EXOC3L4Q17RC7 722 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 CT47A1Q5JQC4 288 aaPredicted RBP16.08■□□□□ 0.16
SMG6-220ENST00000576218 SIX6OS1Q8N1H7 587 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 ANKRD52Q8NB46 1076 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 FAM83CQ9BQN1 747 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 RNF38Q9H0F5 515 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 FAM86C1Q9NVL1 165 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 ANO10Q9NW15 660 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 SCML2Q9UQR0 700 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 MYO16Q9Y6X6 1858 aa16.08■□□□□ 0.16
SMG6-220ENST00000576218 A0A1W2PQH9 124 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 KCNJ18B7U540 433 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 M0QYV0 167 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 SCAMP3O14828 347 aaKnown RBP16.07■□□□□ 0.16
SMG6-220ENST00000576218 ATP5C1P36542 298 aaKnown RBP16.07■□□□□ 0.16
SMG6-220ENST00000576218 PSEN1P49768 467 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 KCNJ12Q14500 433 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 STILQ15468 1287 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 C10orf120Q5SQS8 335 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 TRIM65Q6PJ69 517 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 RSRC2Q7L4I2 434 aaKnown RBP16.07■□□□□ 0.16
SMG6-220ENST00000576218 ENOSF1Q7L5Y1 443 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 PIGZQ86VD9 579 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 C1orf210Q8IVY1 113 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 ARHGAP18Q8N392 663 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 ANKRD20A12PQ8NF67 263 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 LMO3Q8TAP4 145 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 UBA3Q8TBC4 463 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 CDK5RAP1Q96SZ6 601 aaKnown RBP16.07■□□□□ 0.16
SMG6-220ENST00000576218 TUBGCP2Q9BSJ2 902 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 LMAN1LQ9HAT1 526 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 HPS4Q9NQG7 708 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 IL37Q9NZH6 218 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 NFE2L3Q9Y4A8 694 aa16.07■□□□□ 0.16
SMG6-220ENST00000576218 FAM92AA1XBS5 289 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 HHLA1C9JL84 531 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 XPO1O14980 1071 aaKnown RBP16.06■□□□□ 0.16
SMG6-220ENST00000576218 OLFM2O95897 454 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 SETSIPP0DME0 302 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 RARGP13631 454 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 TCF3P15923 654 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms