RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 TTLL2Q9BWV7 592 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 SLC46A2Q9BY10 475 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 ULBP1Q9BZM6 244 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 EPHX3Q9H6B9 360 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 CCSER2Q9H7U1 834 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 KCNK12Q9HB15 430 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 NMUR1Q9HB89 426 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 CSNK1G1Q9HCP0 422 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 HSFX1Q9UBD0 423 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 CHORDC1Q9UHD1 332 aaPredicted RBP8.35□□□□□ -1.07
CCDC40-215ENST00000576033 DPP7Q9UHL4 492 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 CNTN6Q9UQ52 1028 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 TECTAO75443 2155 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 MIA3Q5JRA6 1907 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 ATP8B3O60423 1300 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 A0A1W2PQC6 194 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 A0A1W2PQH9 124 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 TBX18O95935 607 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 ABL1P00519 1130 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 PDGFBP01127 241 aaPredicted RBP8.34□□□□□ -1.07
CCDC40-215ENST00000576033 FAM163BP0C2L3 166 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 CSH1P0DML2 217 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 CSH2P0DML3 217 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 VDRP11473 427 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 LCP1P13796 627 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 CHRNB2P17787 502 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 MFAP3P55082 362 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 ARID5AQ03989 594 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 SMARCB1Q12824 385 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 TAF12Q16514 161 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 CYP4A22Q5TCH4 519 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 NAIF1Q69YI7 327 aaPredicted RBP8.34□□□□□ -1.07
CCDC40-215ENST00000576033 TRIM68Q6AZZ1 485 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 VITQ6UXI7 678 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 SCD5Q86SK9 330 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 ITIH5Q86UX2 942 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 FAM71AQ8IYT1 594 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 NUP93Q8N1F7 819 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 WDTC1Q8N5D0 677 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 ARL14EPQ8N8R7 260 aaPredicted RBP8.34□□□□□ -1.07
CCDC40-215ENST00000576033 TC2NQ8N9U0 490 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 C1orf131Q8NDD1 294 aaKnown RBP8.34□□□□□ -1.07
CCDC40-215ENST00000576033 DDX1Q92499 740 aaKnown RBP8.34□□□□□ -1.07
CCDC40-215ENST00000576033 BAP1Q92560 729 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 FBXO32Q969P5 355 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 TRMT2BQ96GJ1 504 aaKnown RBP8.34□□□□□ -1.07
CCDC40-215ENST00000576033 ASB16Q96NS5 453 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 ERGIC2Q96RQ1 377 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 DUSP16Q9BY84 665 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 TTYH3Q9C0H2 523 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 RNF38Q9H0F5 515 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 AVENQ9NQS1 362 aaPredicted RBP8.34□□□□□ -1.07
CCDC40-215ENST00000576033 SMPD4Q9NXE4 827 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 EPS15L1Q9UBC2 864 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 PRKAG3Q9UGI9 489 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 MAFFQ9ULX9 164 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 FAM50BQ9Y247 325 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 NR2E1Q9Y466 385 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 KMT2EQ8IZD2 1858 aa8.34□□□□□ -1.07
CCDC40-215ENST00000576033 ZNF840PA6NDX5 716 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 LRRC53A6NM62 1247 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 ANHXE9PGG2 379 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 XPO1O14980 1071 aaKnown RBP8.33□□□□□ -1.08
CCDC40-215ENST00000576033 GJB6O95452 261 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 MMEP08473 750 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 PAEPP09466 180 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 IRF1P10914 325 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 YWHAQP27348 245 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 TKTL1P51854 596 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 BCAT1P54687 386 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 YWHAEP62258 255 aaKnown RBP8.33□□□□□ -1.08
CCDC40-215ENST00000576033 BST2Q10589 180 aaKnown RBP8.33□□□□□ -1.08
CCDC40-215ENST00000576033 FILIP1LQ4L180 1135 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 LCLAT1Q6UWP7 414 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 CYP26C1Q6V0L0 522 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 OTOP3Q7RTS5 596 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 PHLDB2Q86SQ0 1253 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 ARID3BQ8IVW6 561 aaPredicted RBP8.33□□□□□ -1.08
CCDC40-215ENST00000576033 ZDHHC14Q8IZN3 488 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 ANKRD52Q8NB46 1076 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 CCDC112Q8NEF3 446 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 NEK11Q8NG66 645 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 EPS8L1Q8TE68 723 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 ZNF606Q8WXB4 792 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 EDEM1Q92611 657 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 USP13Q92995 863 aaPredicted RBP8.33□□□□□ -1.08
CCDC40-215ENST00000576033 ACSF2Q96CM8 615 aaPredicted RBP8.33□□□□□ -1.08
CCDC40-215ENST00000576033 P2RY11Q96G91 374 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 FAXDC2Q96IV6 333 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 ZFRQ96KR1 1074 aaKnown RBP8.33□□□□□ -1.08
CCDC40-215ENST00000576033 MYRFLQ96LU7 910 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 GCNAQ96QF7 691 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 CPXM1Q96SM3 734 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 MIS12Q9H081 205 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 C11orf16Q9NQ32 467 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 IL37Q9NZH6 218 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 NOCTQ9UK39 431 aaKnown RBP8.33□□□□□ -1.08
CCDC40-215ENST00000576033 USTQ9Y2C2 406 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 ASB3Q9Y575 518 aa8.33□□□□□ -1.08
CCDC40-215ENST00000576033 KIAA1549LQ6ZVL6 1849 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms