RNA–Protein interactions for RNA: ENST00000576019.5

VPS53-219, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-219ENST00000576019 CSGALNACT1Q8TDX6 532 aa6.42□□□□□ -1.38
VPS53-219ENST00000576019 EID2BQ96D98 161 aa6.42□□□□□ -1.38
VPS53-219ENST00000576019 MEGF10Q96KG7 1140 aa6.42□□□□□ -1.38
VPS53-219ENST00000576019 OSBPL6Q9BZF3 934 aa6.42□□□□□ -1.38
VPS53-219ENST00000576019 DPH1Q9BZG8 443 aa6.42□□□□□ -1.38
VPS53-219ENST00000576019 GPR63Q9BZJ6 419 aa6.42□□□□□ -1.38
VPS53-219ENST00000576019 GHITMQ9H3K2 345 aa6.42□□□□□ -1.38
VPS53-219ENST00000576019 INCENPQ9NQS7 918 aa6.42□□□□□ -1.38
VPS53-219ENST00000576019 HAUS2Q9NVX0 235 aa6.42□□□□□ -1.38
VPS53-219ENST00000576019 CEP72Q9P209 647 aa6.42□□□□□ -1.38
VPS53-219ENST00000576019 EBF1Q9UH73 591 aa6.42□□□□□ -1.38
VPS53-219ENST00000576019 HERC5Q9UII4 1024 aaKnown RBP6.42□□□□□ -1.38
VPS53-219ENST00000576019 MAGEL2Q9UJ55 1249 aa6.42□□□□□ -1.38
VPS53-219ENST00000576019 VPS28Q9UK41 221 aa6.42□□□□□ -1.38
VPS53-219ENST00000576019 PLAGL2Q9UPG8 496 aa6.42□□□□□ -1.38
VPS53-219ENST00000576019 HS3ST4Q9Y661 456 aa6.42□□□□□ -1.38
VPS53-219ENST00000576019 MYBBP1AQ9BQG0 1328 aaKnown RBP6.42□□□□□ -1.38
VPS53-219ENST00000576019 MAST2Q6P0Q8 1798 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 MYO9BQ13459 2157 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 WDR87Q6ZQQ6 2873 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 A0A087WZ62 844 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 A0A0A6YYK5 440 aaPredicted RBP6.41□□□□□ -1.38
VPS53-219ENST00000576019 A0A1W2PQJ5 194 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 PI4KAP2A4QPH2 592 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 PYCARD-AS1I3L0S3 204 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 COBLO75128 1261 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 USP1O94782 785 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 ACTL6BO94805 426 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 STARD3NLO95772 234 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 ABHD16AO95870 558 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 AMY1AP04745 511 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 FTH1P19P0C7X4 201 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 RPS12P25398 132 aaKnown RBP6.41□□□□□ -1.38
VPS53-219ENST00000576019 PHKA1P46020 1223 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 AMPHP49418 695 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 VAMP2P63027 116 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 SNRPNP63162 240 aaKnown RBP6.41□□□□□ -1.38
VPS53-219ENST00000576019 KCNMA1Q12791 1236 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 EFR3AQ14156 821 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 BICRALQ6AI39 1079 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 ACAD10Q6JQN1 1059 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 LINC00114Q6XXX2 140 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 ARMC9Q7Z3E5 817 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 DNAJC10Q8IXB1 793 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 NRSN1Q8IZ57 195 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 MPP5Q8N3R9 675 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 DCBLD1Q8N8Z6 715 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 FBXO18Q8NFZ0 1043 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 OR5AN1Q8NGI8 311 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 NEDD1Q8NHV4 660 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 SCAMP5Q8TAC9 235 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 ADAMTS15Q8TE58 950 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 LENG1Q96BZ8 264 aaPredicted RBP6.41□□□□□ -1.38
VPS53-219ENST00000576019 RADILQ96JH8 1075 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 SOX7Q9BT81 388 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 CHST8Q9H2A9 424 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 RETREG1Q9H6L5 497 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 KCMF1Q9P0J7 381 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 MED16Q9Y2X0 877 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 TAF6LQ9Y6J9 622 aa6.41□□□□□ -1.38
VPS53-219ENST00000576019 A0A0G2JMZ2 1700 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 GNB5O14775 395 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 URI1O94763 535 aaPredicted RBP6.4□□□□□ -1.38
VPS53-219ENST00000576019 GLI4P10075 376 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 APEX1P27695 318 aaKnown RBP6.4□□□□□ -1.38
VPS53-219ENST00000576019 HOXD10P28358 340 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 GSK3AP49840 483 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 CHRNDQ07001 517 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 CTBP1Q13363 440 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 PUM1Q14671 1186 aaKnown RBP eCLIP6.4□□□□□ -1.38
VPS53-219ENST00000576019 MST1LQ2TV78 715 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 SLC44A4Q53GD3 710 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 RRAGAQ7L523 313 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 TRMT2AQ8IZ69 625 aaKnown RBP6.4□□□□□ -1.38
VPS53-219ENST00000576019 PQLC1Q8N2U9 271 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 VGLL2Q8N8G2 317 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 OR56A3Q8NH54 315 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 CEP70Q8NHQ1 597 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 ZNF518BQ9C0D4 1074 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 PABPC3Q9H361 631 aaKnown RBP6.4□□□□□ -1.38
VPS53-219ENST00000576019 ELAC1Q9H777 363 aaKnown RBP6.4□□□□□ -1.38
VPS53-219ENST00000576019 TMEM8AQ9HCN3 771 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 PLSCR4Q9NRQ2 329 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 RBPJLQ9UBG7 517 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 LPAR3Q9UBY5 353 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 CNPY2Q9Y2B0 182 aa6.4□□□□□ -1.38
VPS53-219ENST00000576019 MTO1Q9Y2Z2 717 aaKnown RBP6.4□□□□□ -1.38
VPS53-219ENST00000576019 CCDC196A0A1B0GTZ2 297 aa6.39□□□□□ -1.39
VPS53-219ENST00000576019 PABPN1LA6NDY0 278 aaKnown RBP6.39□□□□□ -1.39
VPS53-219ENST00000576019 PSMD14O00487 310 aa6.39□□□□□ -1.39
VPS53-219ENST00000576019 DCXO43602 365 aa6.39□□□□□ -1.39
VPS53-219ENST00000576019 TLR2O60603 784 aa6.39□□□□□ -1.39
VPS53-219ENST00000576019 CUTAO60888 179 aa6.39□□□□□ -1.39
VPS53-219ENST00000576019 CAMTA2O94983 1202 aa6.39□□□□□ -1.39
VPS53-219ENST00000576019 MATN4O95460 622 aa6.39□□□□□ -1.39
VPS53-219ENST00000576019 CD1AP06126 327 aa6.39□□□□□ -1.39
VPS53-219ENST00000576019 PRKCAP17252 672 aa6.39□□□□□ -1.39
VPS53-219ENST00000576019 ALOX12P18054 663 aa6.39□□□□□ -1.39
VPS53-219ENST00000576019 KLRC1P26715 233 aa6.39□□□□□ -1.39
VPS53-219ENST00000576019 NF2P35240 595 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms